Detail information of GWHGAAEX010136/evm.TU.scaffold_27.121


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695059987|ref|XP_009418370.1|8.12E-175PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q689D6|RPD1_ARATH4.00E-34Protein ROOT PRIMORDIUM DEFECTIVE 1
trEMBLtr|I1NAZ3|I1NAZ3_SOYBN2.00E-143Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39200.1}
TAIRAT3G585206.00E-134Ubiquitin carboxyl-terminal hydrolase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002365644076566565-
Transcript Sequence

Network for GWHGAAEX010136

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11955.7PORR423773.10E-98
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.220
SRR2545915Juvenile tuber4.230
SRP108465SRR5643513five period of Gastrodia elata10.050
SRR5643514five period of Gastrodia elata8.090
SRR5643515five period of Gastrodia elata8.010
SRR5643524five period of Gastrodia elata10.130
SRR5643525five period of Gastrodia elata13.560
SRR5643528five period of Gastrodia elata11.960
SRR5643658five period of Gastrodia elata5.290
SRR5643659five period of Gastrodia elata12.990
SRR5643660five period of Gastrodia elata13.310
SRR5643661five period of Gastrodia elata13.720
SRR5643662five period of Gastrodia elata15.090
SRR5643663five period of Gastrodia elata14.120
SRR5643664five period of Gastrodia elata7.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.200
SRR6049655Rhizomagastrodiae_C368-T10_good_115.060
SRR6049656Rhizomagastrodiae_C368-T07_good_110.040
SRR6049657Rhizomagastrodiae_C368-T07_good_19.270
SRR6049658Rhizomagastrodiae_C368-T04_good_17.850
SRR6049659Rhizomagastrodiae_C368-T04_good_16.710
SRR6049660Rhizomagastrodiae_C368-T01_good_18.300
SRR6049661Rhizomagastrodiae_C368-T04_good_18.990
SRR6049662Rhizomagastrodiae_C368-T01_good_112.740
SRR6049663Rhizomagastrodiae_C368-T01_good_19.830
SRR6049664Rhizomagastrodiae_C368-T10_good_110.460
SRR6049665Rhizomagastrodiae_C368-T10_good_110.460
SRP279888GastroGastrodia elata tuber 10.22
JuvenJuvenile tuber11.63
Mother_GastroMother tuber of Gastrodia elata 9.11
Mother_JuvenMother tuber of Juvenile 12.09