Detail information of GWHGAAEX010142/evm.TU.scaffold_27.131


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16012.00E-13GATA-4/5/6 transcription factors
nrgi|743759971|ref|XP_010934681.1|2.30E-38PREDICTED: uncharacterized protein LOC105054785 [Elaeis guineensis]
Swissprottr|Q9FHH8|COL5_ARATH5.00E-14Zinc finger protein CONSTANS-LIKE 5
trEMBLtr|M0SPQ0|M0SPQ0_MUSAM4.00E-27Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P17370_001}
TAIRAT5G576602.00E-13CONSTANS-like 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002370238127046746-
Transcript Sequence

Network for GWHGAAEX010142

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06203.13CCT1211634.70E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.090
SRR2545915Juvenile tuber23.270
SRP108465SRR5643513five period of Gastrodia elata22.990
SRR5643514five period of Gastrodia elata16.670
SRR5643515five period of Gastrodia elata24.350
SRR5643524five period of Gastrodia elata19.790
SRR5643525five period of Gastrodia elata28.610
SRR5643528five period of Gastrodia elata28.480
SRR5643658five period of Gastrodia elata28.270
SRR5643659five period of Gastrodia elata25.810
SRR5643660five period of Gastrodia elata27.510
SRR5643661five period of Gastrodia elata32.380
SRR5643662five period of Gastrodia elata34.770
SRR5643663five period of Gastrodia elata31.140
SRR5643664five period of Gastrodia elata30.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.560
SRR6049655Rhizomagastrodiae_C368-T10_good_118.340
SRR6049656Rhizomagastrodiae_C368-T07_good_119.550
SRR6049657Rhizomagastrodiae_C368-T07_good_120.860
SRR6049658Rhizomagastrodiae_C368-T04_good_118.130
SRR6049659Rhizomagastrodiae_C368-T04_good_122.950
SRR6049660Rhizomagastrodiae_C368-T01_good_116.700
SRR6049661Rhizomagastrodiae_C368-T04_good_118.140
SRR6049662Rhizomagastrodiae_C368-T01_good_116.420
SRR6049663Rhizomagastrodiae_C368-T01_good_114.600
SRR6049664Rhizomagastrodiae_C368-T10_good_115.230
SRR6049665Rhizomagastrodiae_C368-T10_good_115.230
SRP279888GastroGastrodia elata tuber 28.92
JuvenJuvenile tuber48.18
Mother_GastroMother tuber of Gastrodia elata 77.54
Mother_JuvenMother tuber of Juvenile 101.40