Detail information of GWHGAAEX010145/evm.TU.scaffold_270.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33439.00E-83Vesicle coat complex COPI, zeta subunit
nrgi|695055529|ref|XP_009415949.1|1.84E-112PREDICTED: coatomer subunit zeta-1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q6Z844|COPZ2_ORYSJ1.00E-100Coatomer subunit zeta-2
trEMBLtr|M0TWM6|M0TWM6_MUSAM6.00E-113Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P01690_001}
TAIRAT3G098009.00E-83SNARE-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000304361576387842+
Transcript Sequence

Network for GWHGAAEX010145

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01217.19Clat_adaptor_s71402.60E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms135.290
SRR2545915Juvenile tuber126.740
SRP108465SRR5643513five period of Gastrodia elata60.330
SRR5643514five period of Gastrodia elata53.150
SRR5643515five period of Gastrodia elata57.670
SRR5643524five period of Gastrodia elata57.270
SRR5643525five period of Gastrodia elata72.300
SRR5643528five period of Gastrodia elata107.470
SRR5643658five period of Gastrodia elata78.000
SRR5643659five period of Gastrodia elata81.300
SRR5643660five period of Gastrodia elata78.670
SRR5643661five period of Gastrodia elata77.910
SRR5643662five period of Gastrodia elata76.040
SRR5643663five period of Gastrodia elata90.340
SRR5643664five period of Gastrodia elata70.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_165.960
SRR6049655Rhizomagastrodiae_C368-T10_good_190.400
SRR6049656Rhizomagastrodiae_C368-T07_good_175.020
SRR6049657Rhizomagastrodiae_C368-T07_good_169.600
SRR6049658Rhizomagastrodiae_C368-T04_good_165.620
SRR6049659Rhizomagastrodiae_C368-T04_good_173.700
SRR6049660Rhizomagastrodiae_C368-T01_good_164.940
SRR6049661Rhizomagastrodiae_C368-T04_good_162.890
SRR6049662Rhizomagastrodiae_C368-T01_good_177.980
SRR6049663Rhizomagastrodiae_C368-T01_good_168.660
SRR6049664Rhizomagastrodiae_C368-T10_good_193.890
SRR6049665Rhizomagastrodiae_C368-T10_good_193.890
SRP279888GastroGastrodia elata tuber 107.25
JuvenJuvenile tuber76.70
Mother_GastroMother tuber of Gastrodia elata 90.38
Mother_JuvenMother tuber of Juvenile 99.93