Detail information of GWHGAAEX010149/evm.TU.scaffold_271.7
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|110639481|ref|YP_679690.1| | 1.00E-20 | inorganic pyrophosphatase [Cytophaga hutchinsonii ATCC 33406] |
| KOG | KOG1626 | 1.00E-46 | Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 |
| nr | gi|374255979|gb|AEZ00851.1| | 9.55E-48 | putative soluble inorganic pyrophosphatase, partial [Elaeis guineensis] |
| Swissprot | tr|Q43187|IPYR_SOLTU | 1.00E-43 | Soluble inorganic pyrophosphatase |
| trEMBL | tr|H6TNM2|H6TNM2_ELAGV | 4.00E-48 | Putative soluble inorganic pyrophosphatase {ECO:0000313|EMBL:AEZ00851.1} (Fragment) |
| TAIR | AT3G53620 | 1.00E-46 | pyrophosphorylase 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000266 | 342602 | 342865 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010149
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00719.18 | Pyrophosphatase | 2 | 77 | 2.30E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01507 | ppa | Oxidative phosphorylation | map00190 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006796 | Biological Process | phosphate-containing compound metabolic process |
| GO:0004427 | Molecular Function | inorganic diphosphatase activity |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.000 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.000 | |
| SRR5643524 | five period of Gastrodia elata | 0.000 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 0.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 0.00 |