Detail information of GWHGAAEX010162/evm.TU.scaffold_275.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743886401|ref|XP_010910136.1|6.55E-87PREDICTED: uncharacterized protein LOC105036094 [Elaeis guineensis]
trEMBLtr|M0SR85|M0SR85_MUSAM3.00E-77Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P22730_001}
TAIRAT5G065601.00E-74Protein of unknown function, DUF593

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002701973427564+
Transcript Sequence

Network for GWHGAAEX010162

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04576.14Zein-binding601471.80E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.700
SRR2545915Juvenile tuber13.740
SRP108465SRR5643513five period of Gastrodia elata19.120
SRR5643514five period of Gastrodia elata20.820
SRR5643515five period of Gastrodia elata21.900
SRR5643524five period of Gastrodia elata20.900
SRR5643525five period of Gastrodia elata22.950
SRR5643528five period of Gastrodia elata25.050
SRR5643658five period of Gastrodia elata25.040
SRR5643659five period of Gastrodia elata17.020
SRR5643660five period of Gastrodia elata19.360
SRR5643661five period of Gastrodia elata17.930
SRR5643662five period of Gastrodia elata22.320
SRR5643663five period of Gastrodia elata19.700
SRR5643664five period of Gastrodia elata20.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.800
SRR6049655Rhizomagastrodiae_C368-T10_good_113.030
SRR6049656Rhizomagastrodiae_C368-T07_good_122.220
SRR6049657Rhizomagastrodiae_C368-T07_good_123.730
SRR6049658Rhizomagastrodiae_C368-T04_good_122.920
SRR6049659Rhizomagastrodiae_C368-T04_good_121.680
SRR6049660Rhizomagastrodiae_C368-T01_good_121.700
SRR6049661Rhizomagastrodiae_C368-T04_good_120.720
SRR6049662Rhizomagastrodiae_C368-T01_good_122.450
SRR6049663Rhizomagastrodiae_C368-T01_good_122.740
SRR6049664Rhizomagastrodiae_C368-T10_good_125.220
SRR6049665Rhizomagastrodiae_C368-T10_good_125.220
SRP279888GastroGastrodia elata tuber 18.42
JuvenJuvenile tuber24.67
Mother_GastroMother tuber of Gastrodia elata 27.14
Mother_JuvenMother tuber of Juvenile 30.60