Detail information of GWHGAAEX010170/evm.TU.scaffold_275.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695081368|ref|XP_009388199.1|2.47E-11PREDICTED: rapid alkalinization factor-like [Musa acuminata subsp. malaccensis]

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000270169956170836-
Transcript Sequence

Network for GWHGAAEX010170

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05498.10RALF51989.40E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms45.030
SRR2545915Juvenile tuber61.800
SRP108465SRR5643513five period of Gastrodia elata90.910
SRR5643514five period of Gastrodia elata128.070
SRR5643515five period of Gastrodia elata81.900
SRR5643524five period of Gastrodia elata109.330
SRR5643525five period of Gastrodia elata116.360
SRR5643528five period of Gastrodia elata79.520
SRR5643658five period of Gastrodia elata103.630
SRR5643659five period of Gastrodia elata55.500
SRR5643660five period of Gastrodia elata66.170
SRR5643661five period of Gastrodia elata56.160
SRR5643662five period of Gastrodia elata61.710
SRR5643663five period of Gastrodia elata65.080
SRR5643664five period of Gastrodia elata53.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.740
SRR6049655Rhizomagastrodiae_C368-T10_good_129.720
SRR6049656Rhizomagastrodiae_C368-T07_good_143.060
SRR6049657Rhizomagastrodiae_C368-T07_good_154.910
SRR6049658Rhizomagastrodiae_C368-T04_good_131.510
SRR6049659Rhizomagastrodiae_C368-T04_good_131.450
SRR6049660Rhizomagastrodiae_C368-T01_good_132.710
SRR6049661Rhizomagastrodiae_C368-T04_good_135.330
SRR6049662Rhizomagastrodiae_C368-T01_good_140.700
SRR6049663Rhizomagastrodiae_C368-T01_good_120.440
SRR6049664Rhizomagastrodiae_C368-T10_good_142.550
SRR6049665Rhizomagastrodiae_C368-T10_good_142.550
SRP279888GastroGastrodia elata tuber 44.34
JuvenJuvenile tuber28.30
Mother_GastroMother tuber of Gastrodia elata 24.16
Mother_JuvenMother tuber of Juvenile 20.92