Detail information of GWHGAAEX010175/evm.TU.scaffold_275.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695047708|ref|XP_009411742.1|0PREDICTED: scarecrow-like protein 3 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LPR8|SCL3_ARATH4.00E-157Scarecrow-like protein 3
trEMBLtr|M0TP22|M0TP22_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P09690_001}
TAIRAT1G504201.00E-156scarecrow-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000270301174303164-
Transcript Sequence

Network for GWHGAAEX010175

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.13GRAS414111.50E-132
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.750
SRR2545915Juvenile tuber5.070
SRP108465SRR5643513five period of Gastrodia elata16.070
SRR5643514five period of Gastrodia elata11.220
SRR5643515five period of Gastrodia elata14.250
SRR5643524five period of Gastrodia elata11.800
SRR5643525five period of Gastrodia elata32.080
SRR5643528five period of Gastrodia elata28.510
SRR5643658five period of Gastrodia elata18.960
SRR5643659five period of Gastrodia elata2.300
SRR5643660five period of Gastrodia elata1.620
SRR5643661five period of Gastrodia elata3.230
SRR5643662five period of Gastrodia elata2.320
SRR5643663five period of Gastrodia elata2.380
SRR5643664five period of Gastrodia elata5.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.310
SRR6049655Rhizomagastrodiae_C368-T10_good_119.170
SRR6049656Rhizomagastrodiae_C368-T07_good_117.340
SRR6049657Rhizomagastrodiae_C368-T07_good_114.250
SRR6049658Rhizomagastrodiae_C368-T04_good_115.510
SRR6049659Rhizomagastrodiae_C368-T04_good_117.790
SRR6049660Rhizomagastrodiae_C368-T01_good_124.010
SRR6049661Rhizomagastrodiae_C368-T04_good_112.550
SRR6049662Rhizomagastrodiae_C368-T01_good_121.020
SRR6049663Rhizomagastrodiae_C368-T01_good_125.260
SRR6049664Rhizomagastrodiae_C368-T10_good_118.150
SRR6049665Rhizomagastrodiae_C368-T10_good_118.150
SRP279888GastroGastrodia elata tuber 2.26
JuvenJuvenile tuber9.29
Mother_GastroMother tuber of Gastrodia elata 29.56
Mother_JuvenMother tuber of Juvenile 27.60