Detail information of GWHGAAEX010179/evm.TU.scaffold_275.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218929704|ref|YP_002347579.1|5.00E-06asparagine synthetase B [Yersinia pestis CO92]
nrgi|567853848|ref|XP_006420044.1|9.33E-131hypothetical protein CICLE_v10005714mg [Citrus clementina]
Swissprottr|P24805|TSJT1_TOBAC2.00E-37Stem-specific protein TSJT1
trEMBLtr|A0A067GG57|A0A067GG57_CITSI3.00E-131Uncharacterized protein {ECO:0000313|EMBL:KDO74437.1}
TAIRAT3G228502.00E-117Aluminium induced protein with YGL and LRDR motifs

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000270403373414085-
Transcript Sequence

Network for GWHGAAEX010179

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12481.7DUF370022282.70E-105
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms51.060
SRR2545915Juvenile tuber64.530
SRP108465SRR5643513five period of Gastrodia elata174.090
SRR5643514five period of Gastrodia elata330.190
SRR5643515five period of Gastrodia elata223.970
SRR5643524five period of Gastrodia elata311.290
SRR5643525five period of Gastrodia elata103.020
SRR5643528five period of Gastrodia elata109.440
SRR5643658five period of Gastrodia elata97.980
SRR5643659five period of Gastrodia elata68.340
SRR5643660five period of Gastrodia elata72.730
SRR5643661five period of Gastrodia elata84.370
SRR5643662five period of Gastrodia elata69.000
SRR5643663five period of Gastrodia elata61.110
SRR5643664five period of Gastrodia elata69.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1175.380
SRR6049655Rhizomagastrodiae_C368-T10_good_1192.940
SRR6049656Rhizomagastrodiae_C368-T07_good_1198.990
SRR6049657Rhizomagastrodiae_C368-T07_good_1105.400
SRR6049658Rhizomagastrodiae_C368-T04_good_1137.890
SRR6049659Rhizomagastrodiae_C368-T04_good_1139.230
SRR6049660Rhizomagastrodiae_C368-T01_good_1107.150
SRR6049661Rhizomagastrodiae_C368-T04_good_1124.430
SRR6049662Rhizomagastrodiae_C368-T01_good_1245.240
SRR6049663Rhizomagastrodiae_C368-T01_good_1209.590
SRR6049664Rhizomagastrodiae_C368-T10_good_1390.810
SRR6049665Rhizomagastrodiae_C368-T10_good_1390.810
SRP279888GastroGastrodia elata tuber 95.91
JuvenJuvenile tuber113.83
Mother_GastroMother tuber of Gastrodia elata 131.35
Mother_JuvenMother tuber of Juvenile 132.91