Detail information of GWHGAAEX010190/evm.TU.scaffold_276.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42232.00E-138Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily)
nrgi|596186423|ref|XP_007223340.1|1.83E-157hypothetical protein PRUPE_ppa007408mg [Prunus persica]
trEMBLtr|M5XF48|M5XF48_PRUPE7.00E-158Uncharacterized protein {ECO:0000313|EMBL:EMJ24539.1}
TAIRAT5G085802.00E-138Calcium-binding EF hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000269415996454840-
Transcript Sequence

Network for GWHGAAEX010190

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13202.5EF-hand_51611730.11
PF13202.5EF-hand_51962170.06
PF13202.5EF-hand_52802990.0025
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.430
SRR2545915Juvenile tuber20.950
SRP108465SRR5643513five period of Gastrodia elata34.140
SRR5643514five period of Gastrodia elata29.150
SRR5643515five period of Gastrodia elata30.320
SRR5643524five period of Gastrodia elata33.090
SRR5643525five period of Gastrodia elata28.560
SRR5643528five period of Gastrodia elata25.330
SRR5643658five period of Gastrodia elata27.200
SRR5643659five period of Gastrodia elata28.350
SRR5643660five period of Gastrodia elata26.190
SRR5643661five period of Gastrodia elata33.270
SRR5643662five period of Gastrodia elata28.430
SRR5643663five period of Gastrodia elata26.640
SRR5643664five period of Gastrodia elata24.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.440
SRR6049655Rhizomagastrodiae_C368-T10_good_142.240
SRR6049656Rhizomagastrodiae_C368-T07_good_128.800
SRR6049657Rhizomagastrodiae_C368-T07_good_131.840
SRR6049658Rhizomagastrodiae_C368-T04_good_130.060
SRR6049659Rhizomagastrodiae_C368-T04_good_129.350
SRR6049660Rhizomagastrodiae_C368-T01_good_128.600
SRR6049661Rhizomagastrodiae_C368-T04_good_134.610
SRR6049662Rhizomagastrodiae_C368-T01_good_130.860
SRR6049663Rhizomagastrodiae_C368-T01_good_133.070
SRR6049664Rhizomagastrodiae_C368-T10_good_130.820
SRR6049665Rhizomagastrodiae_C368-T10_good_130.820
SRP279888GastroGastrodia elata tuber 45.25
JuvenJuvenile tuber58.31
Mother_GastroMother tuber of Gastrodia elata 27.88
Mother_JuvenMother tuber of Juvenile 44.84