Detail information of GWHGAAEX010191/evm.TU.scaffold_277.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307154267|ref|YP_003889651.1|3.00E-48Serine/threonine-protein kinase-like domain-containing protein [Cyanothece sp. PCC 7822]
KOGKOG02791.00E-174G protein beta subunit-like protein
nrgi|743757826|ref|XP_010923802.1|0PREDICTED: guanine nucleotide-binding protein subunit beta-like protein A [Elaeis guineensis]
Swissprottr|O24076|GBLP_MEDSA0Guanine nucleotide-binding protein subunit beta-like protein
trEMBLtr|W1NXN4|W1NXN4_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERN00036.1}
TAIRAT1G486301.00E-174receptor for activated C kinase 1B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002761512321754-
Transcript Sequence

Network for GWHGAAEX010191

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.31WD409440.00043
PF00400.31WD4064994.60E-07
PF00400.31WD401041411.00E-07
PF00400.31WD401541873.00E-06
PF00400.31WD401952291.10E-06
PF00400.31WD402943180.00083
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms158.060
SRR2545915Juvenile tuber200.750
SRP108465SRR5643513five period of Gastrodia elata309.180
SRR5643514five period of Gastrodia elata303.810
SRR5643515five period of Gastrodia elata270.920
SRR5643524five period of Gastrodia elata313.070
SRR5643525five period of Gastrodia elata115.760
SRR5643528five period of Gastrodia elata144.160
SRR5643658five period of Gastrodia elata104.900
SRR5643659five period of Gastrodia elata314.040
SRR5643660five period of Gastrodia elata313.960
SRR5643661five period of Gastrodia elata342.460
SRR5643662five period of Gastrodia elata283.410
SRR5643663five period of Gastrodia elata277.460
SRR5643664five period of Gastrodia elata260.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1386.920
SRR6049655Rhizomagastrodiae_C368-T10_good_1384.720
SRR6049656Rhizomagastrodiae_C368-T07_good_1403.950
SRR6049657Rhizomagastrodiae_C368-T07_good_1410.320
SRR6049658Rhizomagastrodiae_C368-T04_good_1375.990
SRR6049659Rhizomagastrodiae_C368-T04_good_1394.370
SRR6049660Rhizomagastrodiae_C368-T01_good_1442.030
SRR6049661Rhizomagastrodiae_C368-T04_good_1389.600
SRR6049662Rhizomagastrodiae_C368-T01_good_1463.970
SRR6049663Rhizomagastrodiae_C368-T01_good_1460.240
SRR6049664Rhizomagastrodiae_C368-T10_good_1466.820
SRR6049665Rhizomagastrodiae_C368-T10_good_1466.820
SRP279888GastroGastrodia elata tuber 257.66
JuvenJuvenile tuber383.72
Mother_GastroMother tuber of Gastrodia elata 114.10
Mother_JuvenMother tuber of Juvenile 197.02