Detail information of GWHGAAEX010194/evm.TU.scaffold_277.5
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 9.00E-22 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| nr | gi|743772209|ref|XP_010916408.1| | 1.78E-109 | PREDICTED: putative receptor-like protein kinase At4g00960 [Elaeis guineensis] |
| Swissprot | tr|Q9LDN1|CRK33_ARATH | 1.00E-71 | Putative cysteine-rich receptor-like protein kinase 33 (Precursor) |
| trEMBL | tr|M0S5V9|M0S5V9_MUSAM | 2.00E-99 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P07180_001} |
| TAIR | AT4G11490 | 4.00E-71 | cysteine-rich RLK (RECEPTOR-like protein kinase) 33 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000276 | 163852 | 193377 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010194
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 60 | 223 | 8.70E-35 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_DLSV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.040 |
| SRR2545915 | Juvenile tuber | 3.890 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.080 |
| SRR5643514 | five period of Gastrodia elata | 3.740 | |
| SRR5643515 | five period of Gastrodia elata | 3.140 | |
| SRR5643524 | five period of Gastrodia elata | 3.830 | |
| SRR5643525 | five period of Gastrodia elata | 3.970 | |
| SRR5643528 | five period of Gastrodia elata | 4.900 | |
| SRR5643658 | five period of Gastrodia elata | 4.750 | |
| SRR5643659 | five period of Gastrodia elata | 3.290 | |
| SRR5643660 | five period of Gastrodia elata | 4.280 | |
| SRR5643661 | five period of Gastrodia elata | 3.330 | |
| SRR5643662 | five period of Gastrodia elata | 3.000 | |
| SRR5643663 | five period of Gastrodia elata | 2.910 | |
| SRR5643664 | five period of Gastrodia elata | 3.730 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 3.960 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.380 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.310 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.860 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.840 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.930 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.840 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.890 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.340 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 4.330 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 4.330 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.46 |
| Juven | Juvenile tuber | 6.41 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.23 | |
| Mother_Juven | Mother tuber of Juvenile | 4.30 |