Gene detail

Detail information of GWHGAAEX010201/evm.TU.scaffold_277.13

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4467	2.00E-168	Uncharacterized conserved protein
nr	gi\|743800612\|ref\|XP_010926029.1\|	0	PREDICTED: uncharacterized protein LOC105048428 [Elaeis guineensis]
trEMBL	tr\|M0TGT7\|M0TGT7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P11990_001}
TAIR	AT1G70770	2.00E-168	Protein of unknown function DUF2359, transmembrane

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000276	358159	370399	+

Transcript Sequence
>GWHTAAEX010201 GGCATCATATTAAGTTGGCTCAGTCTCCATTAAAGGAGTATAGAATCTTCAAATAGGTATAATATTAAGTTGTCTTTAGGCTGGTTTACCAGGTCAGTTTGTTGATCCTGACGGGCCCGGCAGGCCGCTCAGGTTTTAAGTAATTGTTAGCAGAGCACGAGCACGCATCCAACACGCATCCAACATCGACGCTTCCGTCTCCGATCTCCTTCAAACCCGCTGCCATGGATCTTGCCGCTGACTCCTCTATCTCGGCAGTCGACGCAGTTGACGATCACTCCAGCGGATCTGCCACAGCCTCATCCAACCACGGATGGCAGAAGGTAACCTATGCCAAACGCCAGCGCAGCCAAAATCAGGCGGCCACCCCCGCCGCTGGGGATCAGAGATCAAATGGAATCCCCCACGTCGAACGCACCAACGTGTTTGCATCAATAGAGCAGAAGGCACAGGAACGCCGCCGCTCCATTGAATCAGCCGCGGCGGCCGCAGACGCTGCCTCTGTATTGAGGCCTGCGGCGGTTGTGGCTGCTTCCGATGAGGATGAGGAAGATAGCGGCGCTGAGGGAGCCGGGGGCACGGGGCAGGAGAACGAGGCAGAGGTGGCTAAGAAGATCAAGCAAAAAAAGCCCAAGAATCCCAAGGTAACCGTTCACGAGGCCGCCTCCAGGATTGACGCGGCAGATCTAGCCGCATACCTTGCAGAGGTGTCGGTTTCCTATGAGTTGCAACATGATATCCAGCTGATGCGATTCGCGGACTATTTTGGGCGAGCATTTTCTACTGTCAGTGCTTCGCAGTTCCCATGGCCGAAAATATTCAAAGAGTCCCCTGTAGCTAAAATAATTGAAGTTCCTGTATGTCACATTCCAGAAGCGGTTTATAAAACTTCAGTTGATTGGATTGCTTTAAAATCACCAGAGGCTCTTGTTGATTTTGTTTTGTGGTGTCTGGATTGTATCTTTGCTGATCTTATTGGTCAACAGGCTGTCACTAAAGGGTTCAAAAAGATCACACAGAAACCTCCTTCAAAGTCTCAGGTGGCCATATTTGTTGTGCTGTCAATGCTTCTCCGCCGAAAACCAGAGGTGCTCAATAGTGTTCTGCCAAAGCTGATGAGAGAGAATCCGCAGCATCAAGGAGCGGAAAAGGTTTCAGTTATTGTGTGGACCATTTCTCAGGCTTCTCAAGGGGATCTAGTGGTGGGGGTGCATGCTTGGGCGCATTACCTCTTGCCTCTCATCTATGGAAAAGCCGGCAATCCCCAGACCAGGGGCATGGCTTTGCAGCTCATCGAGAGTATAATGTCGGAGTCTAAAGCTCGTCCCATTCTAATGAACGGCGCCGTCCGAAAGGGAGAGCGCATCGTGCCTCCGTTTGCACTGGATTTGCTGATGCGCTTCACTTTTCCCGCACCCTCTGCCCGAGTGAAGGCTACGGAGAGGCTGGAAGCTCTTTATCCTGTGCTGAAGGAGCTGGCGCTTGCCGGCCTTCCCAGCTCCAAAACCCTTAAGCAGGCATCCCAACAGATTCTGCTCCTGGCCACAAAGGCGATGCAGGAAAGTAATAATAATACGATGCTGGCTGGAGAAGCTGCGAGCTTATTTATCTGGTGCTTGTCTCAAAATTTAGAGTGTTATAAACAATGGGAAAAGCTTCATATGGAGAATGTGGAGGCGAGCGTGTGTGTTCTGAGGAAGCTATGCGAGGAGTGGAAAGAGCAGGCGAGGAAACTATCGCCCAACGCTCCTCTGCGGGAGACTCTTCAGCGGCTCAGGGAAATGAATGAAGAAGCTTCTTCGGGCGGGGAAGATGCTGCTGCTGCAGATTCTAGAAAGAAGATGATGATGATTAAGGAAGGGGACAAGTTCTGCAAGGTGCTGCTCGGAAGGATAGGGCGACGATCCGCCTGCTTGAAGAGCGCGGCGGCTGTCGCGGCTGTTGGCGTGGCACTTGGTTTCGTCGCCTCCCCTTACTTGGAATCGCTGGCCGGCAGCAACAGCAGCATCAGCAGTTTCCTCACTTCATTTCTCACGTCTTTTCAGCAGCAATCTCTTTGATCAGCGCAGAGAGGATGTGCTCTTGGACGGTTACTTCACTCTTCTAACATTAATAATATTTATTTTCTTTTTTAGAAGCAAGAGACTTTTATGAAAGAGAATGATAGAAAAATTAAGGATTTAACAACAATTTCTTATTATTATTATTATTATTA

Network for GWHGAAEX010201

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10151.8	TMEM214	117	537	3.90E-20

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	136.250
SRP064423	SRR2545915	Juvenile tuber	114.500
SRP108465	SRR5643513	five period of Gastrodia elata	126.360
	SRR5643514	five period of Gastrodia elata	109.310
	SRR5643515	five period of Gastrodia elata	120.810
	SRR5643524	five period of Gastrodia elata	119.230
	SRR5643525	five period of Gastrodia elata	100.240
	SRR5643528	five period of Gastrodia elata	110.500
	SRR5643658	five period of Gastrodia elata	100.530
	SRR5643659	five period of Gastrodia elata	111.540
	SRR5643660	five period of Gastrodia elata	116.940
	SRR5643661	five period of Gastrodia elata	113.370
	SRR5643662	five period of Gastrodia elata	89.740
	SRR5643663	five period of Gastrodia elata	95.440
	SRR5643664	five period of Gastrodia elata	100.570
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	105.520
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	97.110
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	100.980
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	116.230
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	91.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	102.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	106.400
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	93.300
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	99.090
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	99.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	116.920
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	116.920
SRP279888	Gastro	Gastrodia elata tuber	77.08
	Juven	Juvenile tuber	185.03
	Mother_Gastro	Mother tuber of Gastrodia elata	138.18
	Mother_Juven	Mother tuber of Juvenile	207.71