Gene detail

Detail information of GWHGAAEX010202/evm.TU.scaffold_277.14

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743800620\|ref\|XP_010926033.1\|	PREDICTED: uncharacterized protein LOC105048430 isoform X2 [Elaeis guineensis]
trEMBL	tr\|M0SAA8\|M0SAA8_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P22670_001}
TAIR	AT1G48840	Plant protein of unknown function (DUF639)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000276	371052	385378	-

Transcript Sequence
>GWHTAAEX010202 GACATATTCTGACTTGTAAGCAAATTCTTGGCCGAGCAGCTGTCCCGGCAAAATCTTACCCGGGTTTGCACACTGTTTCTCTTCGTCCCCCAATAATTCTTCCAGTCCTTGCTCCACTGTGCCATGAGAGTGGGCATCGGAAGCAGATAGATACAAGGGAAGAAGGCGTCGCCTCGTGCTAAGCTGGTGATTCGGGGATCCAAGCCGCAGTCTGGAAGACGGGGTTCTGATTCCAATTGGTGGAGCAGAACCATTTCTTGATAGATTTACATATACATATTCTTCATATTTCTTGGAATATAAATTTATTTGGGGCTGAGACGCTGACTGGAAATCCAGGGGATAGGGTTTCTAGTTTTGTAGGTAAATCATGGCTATGATGGATAAAACCCGCAATCTTCTGGAGGGGTTCATGGAGGGCCCCTTCAAATGGGCTCTCAATCGCCGTACTTCGTTCGATGAGGAGTTTGAGGAGATGGCCCGATCCCCTTCCGGCAAAAGGAAGTGGATTCCGGAACTCTCTCAGATGGCCAATGTAATTGTTGGCCGCTGTTCTCGAATTCTTGATGTTTCTATGGACGAGCTTCTAGGCAATTTTGATTCTGAAGCCTCTGATGCTTTAAAGAAGTCCCCAAATTATGCCCGAAATTTTTTAGAGTACTGTTGTTTCAGGGCGTTAGCAATAATGACTAAAGTTGTAGGACATCCTTCTGATTCAAAGTTCCGACGGCTTACATTTGATATGATGCTAGCATGGGAAGCTCCATTTTCAGAGATCCCTCCCACACCCAAGCTAGATAAAGACAGCACTGTTGGTTTGGATGCATTTTTGCGCATTGCTCCAGCTGTTCCCATTATTGCAGATGTAATTACATGCTCCAACATCTTTGATGTGCTTGCAAATCCAAATAATTCTCGACTTTCTTTTGCAGTTTATGAAAAGTACCTTGGCGGATTAGACAGAGCACTAAAAAAAATGAAAGCTCAGACAGAGTCGTCCCTTCTTTCAGCTATTCGCTCAGAAAGGGGAGAAAAGATTCTTGAGGTAGATGGGACATTGACGACACAACCTGTTCTTGAACATATAGGCATTTCAACATGGCCTGGAAGATTAACATTGACTGACCACGCTCTGTACTTTGAGGCATTGAAAGTTGTAACTTACGACAAAGCAAAGGAATATAATCTTTCTGACGATTTAAAACAACTTGTTAAGCCAGAGCTGACTGGGCCTTGGGGTTCACGCCTTTTTGACAAGGCAGTTATGTACAAGTCTGTAACCATGTCAGAACCTATTATTGTGGAGTTCCCTGAGCTAACGGGCCATTCTCGTCGAGATTACTGGCTTGCTATTATGAGAGAAATTCTCTATGCTCATAGATTTATTAGAAAAATTCAGATCAAAGGCGTCGACAAAGAAGAAACACTTTCAAAAGCTGTACTAGGAATTCTACGATTGCAAGCTATTCTAGAAATGTTCTCTTCAGCTACGGTCAGTTATGAATCACTTCTAATGTTTAATCTATCTGACAAGCTTCCGGGAGGTGATCTAATACTGGAAACACTTGCTGAAATGATTATCTCCAAAAGTTTTGTTCGGACTAATGGATCTAGATCAGTATCGGGAATGTATTCTATATCCGCTTTGGCAATTTTATCTAATTTAGGAGTTGTTTCAGAAGTTGCAAGTGATGAAAAACTACTTGTGGGAGATATAGTGGTGGGTGAAATGACAAACTTGGAAAAGGTTGTCAGGGAATCTAGACAAAACTACAAAATGGTGGAAAAAGCCCAGGCCACGGTTGCTGGAGTTAAAGTAGATGGTATAGACACAAATTTAGCAGTGATGAAGGAGTTGCTATATCCTGTCATAGAAATTGGAAACAAACTAATGGGTTTGGCTAACTGGGAAGATCCTCATAAGTCTCTACTGTTCTGTTCCATCTCTACCTATATTATCTGCAGGGGATGGATGGGGTATGTGTTGGTGGGGGTGCTGCTGTCTATGGCAATTTTTATGGTGGTGACCAGATTCTACAATCAGGGCAGGCCGGCTGTTGATGAGGTCAAAGTGCAGTCCCCTCCGCCGATGAATGCGATGGAGCAGCTTCTGGCTGTTCAGAGCGCCATCTCTCGGGTTGAGGAGCTTGTGCAGGAGGCAAACATTGTTCTTTTGAAGCTGCGAGCTCTGCTGCTTGGCATCCCTCCCCAGGCAACAAATAGAGTAGTGGTGATAATGATTGCGGCAGCTATATGCCTCGCGTTTCTGCCGACCAAGCTCTTGATTTTGAGTGTGTATTTGGAGATCTTCACGAGGAATTCGCCTCTGAGAAGGGTCAGCACAGATAGATGCACCCGAAGGTTGAGGGAATGGTGGTTCAGCGTGCCTGCGGCTCCTGTTCTTCTTCAAAGACACGAGGAGGATAAAAAGAAGTAGGTCATTTAAATTAAAGTACGATATATATATATATATATATATATAATGTAGTATTTTACGCACTAGTGTGTAAATATTTCAATCAAGCAGTTTGTTGTGCTGTGCAGTATACTTTTTTTTGTCCCTGTATTTGGGTTGTTGTTGCGCAATGCACTCTTATGTGCTGCAGCATTCCTCCCTTTTGTTTTTATGGAGAAATTTTAAAGCCAATAATGATGACAGTTCTTATTATTTGTAGCAACGAATCAACAAAAAATTTATTATGAGGTTGCTTAGCTTAAATGTGTAAATGCGATGAAATGAATTTTATGTTATTTGAAGGAAAAAATTGTCTTGTAGTGTGA

Network for GWHGAAEX010202

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04842.11	DUF639	455	681	5.90E-76

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	40.910
SRP064423	SRR2545915	Juvenile tuber	44.700
SRP108465	SRR5643513	five period of Gastrodia elata	31.740
	SRR5643514	five period of Gastrodia elata	33.350
	SRR5643515	five period of Gastrodia elata	30.650
	SRR5643524	five period of Gastrodia elata	33.670
	SRR5643525	five period of Gastrodia elata	30.740
	SRR5643528	five period of Gastrodia elata	25.340
	SRR5643658	five period of Gastrodia elata	31.130
	SRR5643659	five period of Gastrodia elata	42.330
	SRR5643660	five period of Gastrodia elata	46.620
	SRR5643661	five period of Gastrodia elata	41.600
	SRR5643662	five period of Gastrodia elata	39.280
	SRR5643663	five period of Gastrodia elata	46.510
	SRR5643664	five period of Gastrodia elata	49.340
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	36.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.200
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	32.160
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	35.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	40.740
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	46.650
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	37.960
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	37.580
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	34.270
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	34.330
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	32.900
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	32.900
SRP279888	Gastro	Gastrodia elata tuber	47.71
	Juven	Juvenile tuber	48.54
	Mother_Gastro	Mother tuber of Gastrodia elata	34.92
	Mother_Juven	Mother tuber of Juvenile	42.34