Detail information of GWHGAAEX010206/evm.TU.scaffold_277.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|357158685|ref|XP_003578208.1|6.86E-20PREDICTED: uncharacterized protein LOC100839453 [Brachypodium distachyon]
Swissprottr|Q9SB42|MDA1_ARATH2.00E-06Mediator-associated protein 1
trEMBLtr|I1IQM5|I1IQM5_BRADI3.00E-20Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI4G31840.1}
TAIRAT5G280409.00E-14DNA-binding storekeeper protein-related transcriptional regulator

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000276421478436374-
Transcript Sequence

Network for GWHGAAEX010206

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04504.13DUF5732413371.10E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGeBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.390
SRR2545915Juvenile tuber22.440
SRP108465SRR5643513five period of Gastrodia elata21.800
SRR5643514five period of Gastrodia elata21.920
SRR5643515five period of Gastrodia elata24.210
SRR5643524five period of Gastrodia elata24.990
SRR5643525five period of Gastrodia elata38.710
SRR5643528five period of Gastrodia elata39.850
SRR5643658five period of Gastrodia elata40.090
SRR5643659five period of Gastrodia elata19.390
SRR5643660five period of Gastrodia elata20.750
SRR5643661five period of Gastrodia elata18.690
SRR5643662five period of Gastrodia elata20.520
SRR5643663five period of Gastrodia elata20.520
SRR5643664five period of Gastrodia elata22.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.580
SRR6049655Rhizomagastrodiae_C368-T10_good_123.620
SRR6049656Rhizomagastrodiae_C368-T07_good_123.230
SRR6049657Rhizomagastrodiae_C368-T07_good_120.260
SRR6049658Rhizomagastrodiae_C368-T04_good_125.030
SRR6049659Rhizomagastrodiae_C368-T04_good_133.970
SRR6049660Rhizomagastrodiae_C368-T01_good_125.080
SRR6049661Rhizomagastrodiae_C368-T04_good_121.250
SRR6049662Rhizomagastrodiae_C368-T01_good_121.310
SRR6049663Rhizomagastrodiae_C368-T01_good_127.060
SRR6049664Rhizomagastrodiae_C368-T10_good_124.880
SRR6049665Rhizomagastrodiae_C368-T10_good_124.880
SRP279888GastroGastrodia elata tuber 15.70
JuvenJuvenile tuber13.51
Mother_GastroMother tuber of Gastrodia elata 22.82
Mother_JuvenMother tuber of Juvenile 14.22