Detail information of GWHGAAEX010216/evm.TU.scaffold_279.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|220932744|ref|YP_002509652.1|2.00E-123Alpha-glucosidase [Halothermothrix orenii H 168]
KOGKOG10660Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31
nrgi|743879772|ref|XP_010908477.1|0PREDICTED: probable glucan 1,3-alpha-glucosidase [Elaeis guineensis]
Swissprottr|B9F676|GLU2A_ORYSJ0Probable glucan 1,3-alpha-glucosidase (Precursor)
trEMBLtr|I1H812|I1H812_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G69780.1}
TAIRAT5G638400Glycosyl hydrolases family 31 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000284272329319558+
Transcript Sequence

Network for GWHGAAEX010216

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13802.5Gal_mutarotas_22363124.90E-19
PF01055.25Glyco_hydro_313437876.80E-146
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH31

KEGG pathway

KO Enzyme pathway mapID
K05546GANAB Metabolic pathways map01100
N-Glycan biosynthesismap00510
Protein processing in endoplasmic reticulummap04141

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0030246Molecular Functioncarbohydrate binding
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms68.150
SRR2545915Juvenile tuber74.500
SRP108465SRR5643513five period of Gastrodia elata69.120
SRR5643514five period of Gastrodia elata64.860
SRR5643515five period of Gastrodia elata63.430
SRR5643524five period of Gastrodia elata73.650
SRR5643525five period of Gastrodia elata44.100
SRR5643528five period of Gastrodia elata52.790
SRR5643658five period of Gastrodia elata44.870
SRR5643659five period of Gastrodia elata70.870
SRR5643660five period of Gastrodia elata67.470
SRR5643661five period of Gastrodia elata75.050
SRR5643662five period of Gastrodia elata59.420
SRR5643663five period of Gastrodia elata72.690
SRR5643664five period of Gastrodia elata56.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_184.450
SRR6049655Rhizomagastrodiae_C368-T10_good_187.290
SRR6049656Rhizomagastrodiae_C368-T07_good_179.740
SRR6049657Rhizomagastrodiae_C368-T07_good_174.190
SRR6049658Rhizomagastrodiae_C368-T04_good_169.280
SRR6049659Rhizomagastrodiae_C368-T04_good_172.410
SRR6049660Rhizomagastrodiae_C368-T01_good_168.520
SRR6049661Rhizomagastrodiae_C368-T04_good_174.480
SRR6049662Rhizomagastrodiae_C368-T01_good_179.070
SRR6049663Rhizomagastrodiae_C368-T01_good_176.230
SRR6049664Rhizomagastrodiae_C368-T10_good_181.180
SRR6049665Rhizomagastrodiae_C368-T10_good_181.180
SRP279888GastroGastrodia elata tuber 54.27
JuvenJuvenile tuber92.65
Mother_GastroMother tuber of Gastrodia elata 41.84
Mother_JuvenMother tuber of Juvenile 73.75