Gene detail

Detail information of GWHGAAEX010230/evm.TU.scaffold_28.19

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|56477483\|ref\|YP_159072.1\|	8.00E-101	potassium uptake protein [Aromatoleum aromaticum EbN1]
nr	gi\|695045453\|ref\|XP_009410519.1\|	0	PREDICTED: probable potassium transporter 9 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q7XIV8\|HAK9_ORYSJ	0	Probable potassium transporter 9
trEMBL	tr\|A0A061FZG9\|A0A061FZG9_THECC	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}
TAIR	AT2G40540	0	potassium transporter 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000027	1213564	1227346	+

Transcript Sequence
>GWHTAAEX010230 GAATTAGTTTAGCTGCTTAAAACGAGCGTAATGTGCGCTTTTGTGGTTAGGCAAATTTCACTTTTCTTCTGACTGGATTCCTCCTGCACAGGAATGTCGCCGATTGCAGTCTCCTAGGCTGCGCAATCGACGCGTGCTACTTCGACTTCGAAAATCAAATAGAAGTGCGCAGTCTCTTAGATTGACCGACATGCTGATGTGCATGGAGTCATTGGCATTGATTTTTCTTTGAGATATCCGTCATAAGATTCTTTTGTAAAACAAGGTTTTGTGAAGAGTCAAAGGCAATTTCACGATGGATCCGGAAGCTGCAAAGAGCGCCGATCATCGAAAGAAGCTTTCGTGGAAGGCTACTGTGCTTCTGGCATTTCAGAGTTTGGGCGTTGCCTATGGTGATTTGAGTATTTCTCCTCTATATGTGTACAAGACTACATTTGCTGAAGATATTAGGCACAGTCGCACAAACATAGAGATTTATGGCGTGCTTTCATTTGTTTTCTGGACCCTCACGCTTGTCCCTCTGTTTAAGTATGTCTTCATAGTCCTTCGAGCAGATGATAATGGTGAGGGTGGCACTTTTGCTCTGTATTCTTTGATTTGCAGACATGCAAATGTGAGCCTTCTGCCAAACAAACAGCTTGCTGATGAAGAACTTTCTACTTACATAATAGAGTCCCCACCAGACAGGGGAACTAATTCAAGAATAAAAATTTGGTTGGAGAAGCACAAAAAATTGCACATTGTTCTTCTTATAGTAGTCATGCTTGGTACTGGTATGGTGATTGGAGATGGAGTGCTGACCCCAACACTGTCAGTTTTTTCAGCAGTTACTGGGCTTGAACTTCTAATGTCAAGTCATCAGCATGAATATACGGTGGTTCCTGTCACCTGCTTCATATTAGTATGCCTTTTTGCGCTTCAACATTATGGAACTCATCGGGTTAGTTTCCTATTTGCGCCCATCATACTGACATGGCTGATTTGTATTAGCGGACTTGGCATATACAATATTGCCAGGTGGAACCCAGGCATCATCCAGGCACTTTCTCCTTACTATATGTATAAGTTTTTGAAGAAAACAAAGAAGAATGGGTGGATGTCATTGGGTGGAATTTTACTATGCATCACAGGTTCGGAAGCAATGTTTGCAGATCTCGGCCATTTCTCATACTCGTCCATGCAGATTGCATTCACGTTTGTTGTCTATCCAGCACTGATTTTAGCATACATGGGCCAAGCTGCTTATTTATCACAGCATCACATGATCGATCCTGATTACAAAATTGGATTTTATGTTTATGTTCCAGAAGTTGTGAGATGGCCGGTGTTTCTGCTGGCCGTCGTTGCAGCCATAGTGGGAAGCCAGGCGATCATTAGCTGCACCTTCTCCATCATTAACCAGAGCCACGCTCTTGGCTGCTTCCCAAGAGTCAAGGTCATCCACACGTCTGACAAGATCAGCGGCCAGATTTACATCCCCGAGATCAATTGGATGCTCATGATTCTCTGCGTCGCCGTTGCCGTCGGATTCAGAAACTTGAAGCACGTGGGAAATGCCCAAGGTCTGGCGTTGATGACGGTGATGCTGGTAACCACATGGCTAATGTCGGTGGTGGTGGTCGTGTGTTGGAAAAGATCCCCTCTCCTGGCTCTGTCCTTCCTGGTGTTCTTCAGCGCTATCGAGGGCTTCTTTTTCTCGGCCTGCCTGACGAAGATCCTGGACGGCGCGTGGCTGCCAATCCTCCTCGCTGTCCTCCTGATGACAGTCATGTTCGTCTGGCACTACGCGATGTCGAAGAAGTACGAGCACGATGTTCACAACAAGGTATCGCTGGAGTGGTTGTTGGCACTGGGGGAGAACATCGGCGCCGCCCGTGTCCCCGGCATCGGCCTCGTCTACACCGACCTCATCTCTGGCGTCCCCTCTAGCTTCTCCCACTTCATCACCAACCTCCCCGCCTACCATCGTGTCCTCGTCTTCGTTTGCATCAAGTACATCCCAGTCCCCTTCGTCCCTCCCGCCGAGCGCTACCTCGTCGGCCGTGTCGGCCCCGTCAAGCACCGCTCCTACCGTTGCATCGTCCGCTATGGCTACAGAGATGTGCACCAGGACGTCAACTCCTTTGAGGACGAGCTCACAGTGAGCCTCGCTGACTTCATAAGGATGGACGCGGCCTCCGGCGGTTTCGGCGGTGAGGGCGAGGACGAGGTTGACGGAGGGCTCGCCGTCATCGGGAGCTCCTTATGCATCGAGGAGGCCGATGAGGGCTCCCGCACCGGAAGTGTTTCCTTGGAGCTCGTTGAGGCAAAGTCGCCAAAGAAAGCTAGGAAAGTGAGGTTCCTGATTGAGGAAGGAAGCAGCAGCAACACCAGTAGCAGGCCGAGGATGGTGGACGCGGTGAGGGAGGAGCTTGAAGATCTACAGGAGGCGTGTGAGGCGGGCACAGCGTTCATACTGGGGCACTCCTATGTGAAGACGAAGCCAAGATCTCCTGTCTTGAAGAAGCTCGTGCTGGACGTTGGGTACAATTTTCTAAAGAGGAACTGTCGCAGCCCCGAGGTGGCGCTCTGCGTACCGCCAGCGTCCCTCCTTGAGGTCGGCATGGTCTATGTCCTTTGATATTTCTGTCGCTTTGCTGCTATAAGACATTTATGCTTTAAGCATATTCTTAATTTGATGATCTAATGCCCTTAGGATGTGCTCAAGTGTTTATTAATTATCTTTTAATTATTTATTTATTAATATTTATTATAACTTATTTATGTTGTCTTGGAAGGCTCACTAGATGTTGTCTTGATGAAAGGATCATATGGATTGATATTTGGACAA

Network for GWHGAAEX010230

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02705.15	K_trans	24	602	7.80E-190

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071805	Biological Process	potassium ion transmembrane transport
GO:0015079	Molecular Function	potassium ion transmembrane transporter activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.290
SRP064423	SRR2545915	Juvenile tuber	22.430
SRP108465	SRR5643513	five period of Gastrodia elata	40.090
	SRR5643514	five period of Gastrodia elata	55.330
	SRR5643515	five period of Gastrodia elata	66.440
	SRR5643524	five period of Gastrodia elata	65.910
	SRR5643525	five period of Gastrodia elata	22.360
	SRR5643528	five period of Gastrodia elata	23.430
	SRR5643658	five period of Gastrodia elata	21.040
	SRR5643659	five period of Gastrodia elata	48.110
	SRR5643660	five period of Gastrodia elata	34.480
	SRR5643661	five period of Gastrodia elata	44.820
	SRR5643662	five period of Gastrodia elata	40.400
	SRR5643663	five period of Gastrodia elata	45.750
	SRR5643664	five period of Gastrodia elata	34.300
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	31.930
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	33.290
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	30.770
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	27.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	31.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	32.990
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	29.070
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	42.760
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	40.110
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	35.600
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	35.600
SRP279888	Gastro	Gastrodia elata tuber	28.32
	Juven	Juvenile tuber	29.18
	Mother_Gastro	Mother tuber of Gastrodia elata	47.79
	Mother_Juven	Mother tuber of Juvenile	38.94