Detail information of GWHGAAEX010245/evm.TU.scaffold_28.58


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|407647261|ref|YP_006811020.1|2.00E-08signal transduction protein [Nocardia brasiliensis ATCC 700358]
KOGKOG00273.00E-29Calmodulin and related proteins (EF-Hand superfamily)
nrgi|356562975|ref|XP_003549743.1|7.99E-45PREDICTED: calmodulin-like protein 5-like [Glycine max]
Swissprottr|Q9LNE7|CML7_ARATH8.00E-30Calmodulin-like protein 7
trEMBLtr|I1MU60|I1MU60_SOYBN3.00E-45Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G12040.1}
TAIRAT1G059903.00E-29EF hand calcium-binding protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002732406263248864+
Transcript Sequence

Network for GWHGAAEX010245

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_7591172.10E-12
PF13499.5EF-hand_71341982.90E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.650
SRR2545915Juvenile tuber5.110
SRP108465SRR5643513five period of Gastrodia elata3.820
SRR5643514five period of Gastrodia elata4.780
SRR5643515five period of Gastrodia elata3.450
SRR5643524five period of Gastrodia elata3.340
SRR5643525five period of Gastrodia elata113.670
SRR5643528five period of Gastrodia elata57.230
SRR5643658five period of Gastrodia elata67.440
SRR5643659five period of Gastrodia elata5.090
SRR5643660five period of Gastrodia elata3.090
SRR5643661five period of Gastrodia elata3.350
SRR5643662five period of Gastrodia elata5.810
SRR5643663five period of Gastrodia elata3.000
SRR5643664five period of Gastrodia elata9.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.600
SRR6049655Rhizomagastrodiae_C368-T10_good_16.070
SRR6049656Rhizomagastrodiae_C368-T07_good_12.370
SRR6049657Rhizomagastrodiae_C368-T07_good_13.840
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.800
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_11.640
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_13.550
SRR6049665Rhizomagastrodiae_C368-T10_good_13.550
SRP279888GastroGastrodia elata tuber 7.55
JuvenJuvenile tuber7.33
Mother_GastroMother tuber of Gastrodia elata 16.22
Mother_JuvenMother tuber of Juvenile 9.40