Detail information of GWHGAAEX010250/evm.TU.scaffold_28.66
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|322834007|ref|YP_004214034.1| | 3.00E-57 | adenine phosphoribosyltransferase [Rahnella sp. Y9602] |
| KOG | KOG1712 | 2.00E-83 | Adenine phosphoribosyl transferases |
| nr | gi|672124752|ref|XP_008785773.1| | 2.02E-107 | PREDICTED: adenine phosphoribosyltransferase 2-like [Phoenix dactylifera] |
| Swissprot | tr|Q42563|APT2_ARATH | 5.00E-84 | Adenine phosphoribosyltransferase 2 |
| trEMBL | tr|M0TRK2|M0TRK2_MUSAM | 6.00E-98 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P18490_001} |
| TAIR | AT1G80050 | 2.00E-83 | adenine phosphoribosyl transferase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000027 | 3734053 | 3754950 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010250
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00156.26 | Pribosyltran | 59 | 160 | 1.10E-13 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00759 | APRT, apt | Metabolic pathways | map01100 |
| Purine metabolism | map00230 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009116 | Biological Process | nucleoside metabolic process |
| GO:0006168 | Biological Process | adenine salvage |
| GO:0003999 | Molecular Function | adenine phosphoribosyltransferase activity |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 139.910 |
| SRR2545915 | Juvenile tuber | 118.800 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 97.710 |
| SRR5643514 | five period of Gastrodia elata | 110.980 | |
| SRR5643515 | five period of Gastrodia elata | 100.320 | |
| SRR5643524 | five period of Gastrodia elata | 99.060 | |
| SRR5643525 | five period of Gastrodia elata | 96.040 | |
| SRR5643528 | five period of Gastrodia elata | 91.410 | |
| SRR5643658 | five period of Gastrodia elata | 110.500 | |
| SRR5643659 | five period of Gastrodia elata | 103.500 | |
| SRR5643660 | five period of Gastrodia elata | 117.690 | |
| SRR5643661 | five period of Gastrodia elata | 97.660 | |
| SRR5643662 | five period of Gastrodia elata | 108.250 | |
| SRR5643663 | five period of Gastrodia elata | 131.460 | |
| SRR5643664 | five period of Gastrodia elata | 138.760 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 98.970 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 95.610 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 108.950 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 88.220 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 138.580 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 122.900 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 110.710 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 92.860 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 112.790 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 151.810 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 126.520 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 126.520 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 208.40 |
| Juven | Juvenile tuber | 218.99 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 150.61 | |
| Mother_Juven | Mother tuber of Juvenile | 170.16 |