Detail information of GWHGAAEX010268/evm.TU.scaffold_280.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04741.00E-23Cl- channel CLC-7 and related proteins (CLC superfamily)
nrgi|255536929|ref|XP_002509531.1|2.14E-26chloride channel clc, putative [Ricinus communis]
Swissprottr|P92942|CLCB_ARATH3.00E-24Chloride channel protein CLC-b
trEMBLtr|B9RBJ7|B9RBJ7_RICCO8.00E-27Chloride channel protein {ECO:0000256|RuleBase:RU361221}
TAIRAT3G271701.00E-23chloride channel B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000273407538407932+
Transcript Sequence

Network for GWHGAAEX010268

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata28.120
SRR5643514five period of Gastrodia elata36.300
SRR5643515five period of Gastrodia elata41.710
SRR5643524five period of Gastrodia elata39.110
SRR5643525five period of Gastrodia elata514.260
SRR5643528five period of Gastrodia elata1120.860
SRR5643658five period of Gastrodia elata396.090
SRR5643659five period of Gastrodia elata45.390
SRR5643660five period of Gastrodia elata76.980
SRR5643661five period of Gastrodia elata48.890
SRR5643662five period of Gastrodia elata82.980
SRR5643663five period of Gastrodia elata90.020
SRR5643664five period of Gastrodia elata107.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.520
SRR6049655Rhizomagastrodiae_C368-T10_good_197.920
SRR6049656Rhizomagastrodiae_C368-T07_good_132.790
SRR6049657Rhizomagastrodiae_C368-T07_good_184.200
SRR6049658Rhizomagastrodiae_C368-T04_good_145.160
SRR6049659Rhizomagastrodiae_C368-T04_good_139.140
SRR6049660Rhizomagastrodiae_C368-T01_good_151.330
SRR6049661Rhizomagastrodiae_C368-T04_good_146.990
SRR6049662Rhizomagastrodiae_C368-T01_good_126.110
SRR6049663Rhizomagastrodiae_C368-T01_good_124.220
SRR6049664Rhizomagastrodiae_C368-T10_good_131.630
SRR6049665Rhizomagastrodiae_C368-T10_good_131.630
SRP279888GastroGastrodia elata tuber 311.49
JuvenJuvenile tuber223.83
Mother_GastroMother tuber of Gastrodia elata 689.37
Mother_JuvenMother tuber of Juvenile 786.81