Detail information of GWHGAAEX010270/evm.TU.scaffold_280.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10724.00E-45FOG: Kelch repeat
nrgi|743867004|ref|XP_010905202.1|2.12E-61PREDICTED: F-box/kelch-repeat protein At1g67480-like [Elaeis guineensis]
Swissprottr|Q9CAG8|FBK28_ARATH1.00E-45F-box/kelch-repeat protein At1g67480
trEMBLtr|D7TAV2|D7TAV2_VITVI1.00E-53Putative uncharacterized protein {ECO:0000313|EMBL:CBI27625.3}
TAIRAT1G674804.00E-45Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000273412497413030-
Transcript Sequence

Network for GWHGAAEX010270

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.32F-box47840.00026
PF01344.24Kelch_11341736.80E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms70.350
SRR2545915Juvenile tuber36.110
SRP108465SRR5643513five period of Gastrodia elata15.740
SRR5643514five period of Gastrodia elata16.020
SRR5643515five period of Gastrodia elata21.520
SRR5643524five period of Gastrodia elata15.880
SRR5643525five period of Gastrodia elata48.820
SRR5643528five period of Gastrodia elata33.200
SRR5643658five period of Gastrodia elata57.890
SRR5643659five period of Gastrodia elata12.690
SRR5643660five period of Gastrodia elata12.400
SRR5643661five period of Gastrodia elata13.330
SRR5643662five period of Gastrodia elata9.560
SRR5643663five period of Gastrodia elata17.250
SRR5643664five period of Gastrodia elata9.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.010
SRR6049655Rhizomagastrodiae_C368-T10_good_17.340
SRR6049656Rhizomagastrodiae_C368-T07_good_117.470
SRR6049657Rhizomagastrodiae_C368-T07_good_118.150
SRR6049658Rhizomagastrodiae_C368-T04_good_125.510
SRR6049659Rhizomagastrodiae_C368-T04_good_130.730
SRR6049660Rhizomagastrodiae_C368-T01_good_120.600
SRR6049661Rhizomagastrodiae_C368-T04_good_134.310
SRR6049662Rhizomagastrodiae_C368-T01_good_117.630
SRR6049663Rhizomagastrodiae_C368-T01_good_120.070
SRR6049664Rhizomagastrodiae_C368-T10_good_118.550
SRR6049665Rhizomagastrodiae_C368-T10_good_118.550
SRP279888GastroGastrodia elata tuber 14.91
JuvenJuvenile tuber14.22
Mother_GastroMother tuber of Gastrodia elata 52.47
Mother_JuvenMother tuber of Juvenile 17.09