Detail information of GWHGAAEX010272/evm.TU.scaffold_280.19
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|440681521|ref|YP_007156316.1| | 6.00E-57 | Caffeoyl-CoA O-methyltransferase [Anabaena cylindrica PCC 7122] |
| KOG | KOG1663 | 8.00E-92 | O-methyltransferase |
| nr | gi|700212728|gb|AIU48020.1| | 3.27E-143 | caffeoyl CoA O-methyltransferase [Dendrobium catenatum] |
| Swissprot | tr|Q9C9W3|CAMT1_ARATH | 2.00E-92 | Putative caffeoyl-CoA O-methyltransferase At1g67980 |
| trEMBL | tr|A0A097PJ38|A0A097PJ38_9ASPA | 1.00E-143 | Caffeoyl CoA O-methyltransferase {ECO:0000313|EMBL:AIU48020.1} |
| TAIR | AT1G67980 | 8.00E-92 | caffeoyl-CoA 3-O-methyltransferase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000273 | 431413 | 432928 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010272
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01596.16 | Methyltransf_3 | 25 | 238 | 8.00E-84 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00588 | E2.1.1.104 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 | ||
| Flavonoid biosynthesis | map00941 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008171 | Molecular Function | O-methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 203.090 |
| SRR2545915 | Juvenile tuber | 540.790 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 788.760 |
| SRR5643514 | five period of Gastrodia elata | 479.830 | |
| SRR5643515 | five period of Gastrodia elata | 1114.790 | |
| SRR5643524 | five period of Gastrodia elata | 916.440 | |
| SRR5643525 | five period of Gastrodia elata | 2130.830 | |
| SRR5643528 | five period of Gastrodia elata | 1677.300 | |
| SRR5643658 | five period of Gastrodia elata | 3304.530 | |
| SRR5643659 | five period of Gastrodia elata | 202.790 | |
| SRR5643660 | five period of Gastrodia elata | 211.510 | |
| SRR5643661 | five period of Gastrodia elata | 287.580 | |
| SRR5643662 | five period of Gastrodia elata | 280.290 | |
| SRR5643663 | five period of Gastrodia elata | 263.900 | |
| SRR5643664 | five period of Gastrodia elata | 101.860 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 161.250 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 217.800 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 239.370 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 139.550 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 155.810 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 147.130 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 164.990 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 232.980 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 226.740 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 204.450 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 247.280 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 247.280 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 342.91 |
| Juven | Juvenile tuber | 31.12 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2,291.55 | |
| Mother_Juven | Mother tuber of Juvenile | 972.03 |