Detail information of GWHGAAEX010276/evm.TU.scaffold_282.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34265.00E-57NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit
nrgi|449449258|ref|XP_004142382.1|9.64E-64PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6-like isoform 1 [Cucumis sativus]
Swissprottr|Q9LHI0|NDUA6_ARATH2.00E-57NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
trEMBLtr|A0A0A0KRV0|A0A0A0KRV0_CUCSA4.00E-64Uncharacterized protein {ECO:0000313|EMBL:KGN52333.1}
TAIRAT3G122605.00E-57LYR family of Fe/S cluster biogenesis protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000274177949196434+
Transcript Sequence

Network for GWHGAAEX010276

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03950NDUFA6 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms106.890
SRR2545915Juvenile tuber115.500
SRP108465SRR5643513five period of Gastrodia elata90.060
SRR5643514five period of Gastrodia elata137.880
SRR5643515five period of Gastrodia elata107.630
SRR5643524five period of Gastrodia elata126.020
SRR5643525five period of Gastrodia elata149.330
SRR5643528five period of Gastrodia elata138.490
SRR5643658five period of Gastrodia elata123.710
SRR5643659five period of Gastrodia elata94.210
SRR5643660five period of Gastrodia elata100.520
SRR5643661five period of Gastrodia elata105.730
SRR5643662five period of Gastrodia elata108.410
SRR5643663five period of Gastrodia elata109.250
SRR5643664five period of Gastrodia elata111.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1114.230
SRR6049655Rhizomagastrodiae_C368-T10_good_1227.490
SRR6049656Rhizomagastrodiae_C368-T07_good_1126.010
SRR6049657Rhizomagastrodiae_C368-T07_good_195.180
SRR6049658Rhizomagastrodiae_C368-T04_good_1109.330
SRR6049659Rhizomagastrodiae_C368-T04_good_191.770
SRR6049660Rhizomagastrodiae_C368-T01_good_194.730
SRR6049661Rhizomagastrodiae_C368-T04_good_198.450
SRR6049662Rhizomagastrodiae_C368-T01_good_1135.120
SRR6049663Rhizomagastrodiae_C368-T01_good_1119.500
SRR6049664Rhizomagastrodiae_C368-T10_good_1183.540
SRR6049665Rhizomagastrodiae_C368-T10_good_1183.540
SRP279888GastroGastrodia elata tuber 141.99
JuvenJuvenile tuber111.43
Mother_GastroMother tuber of Gastrodia elata 93.78
Mother_JuvenMother tuber of Juvenile 93.06