Detail information of GWHGAAEX010277/evm.TU.scaffold_282.8
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0627 | 3.00E-81 | Heat shock transcription factor |
| nr | gi|743786075|ref|XP_010922077.1| | 2.68E-107 | PREDICTED: heat stress transcription factor B-4b-like [Elaeis guineensis] |
| Swissprot | tr|Q7XHZ0|HFB4B_ORYSJ | 3.00E-86 | Heat stress transcription factor B-4b |
| trEMBL | tr|M0SMM3|M0SMM3_MUSAM | 3.00E-96 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P10060_001} |
| TAIR | AT1G46264 | 3.00E-81 | heat shock transcription factor B4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000274 | 319305 | 320754 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010277
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00447.16 | HSF_DNA-bind | 25 | 114 | 1.90E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HSF |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0005634 | Cellular Component | nucleus |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.870 |
| SRR2545915 | Juvenile tuber | 29.750 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.490 |
| SRR5643514 | five period of Gastrodia elata | 22.910 | |
| SRR5643515 | five period of Gastrodia elata | 12.680 | |
| SRR5643524 | five period of Gastrodia elata | 16.840 | |
| SRR5643525 | five period of Gastrodia elata | 13.270 | |
| SRR5643528 | five period of Gastrodia elata | 12.910 | |
| SRR5643658 | five period of Gastrodia elata | 6.490 | |
| SRR5643659 | five period of Gastrodia elata | 2.130 | |
| SRR5643660 | five period of Gastrodia elata | 1.780 | |
| SRR5643661 | five period of Gastrodia elata | 0.340 | |
| SRR5643662 | five period of Gastrodia elata | 1.010 | |
| SRR5643663 | five period of Gastrodia elata | 0.340 | |
| SRR5643664 | five period of Gastrodia elata | 0.520 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 20.610 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 29.330 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.550 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.690 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.630 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 18.260 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.600 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 39.130 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.690 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.470 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.470 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.68 |
| Juven | Juvenile tuber | 8.40 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.86 | |
| Mother_Juven | Mother tuber of Juvenile | 1.94 |