Gene detail

Detail information of GWHGAAEX010304/evm.TU.scaffold_287.10

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|449440345\|ref\|XP_004137945.1\|	1.59E-97	PREDICTED: uncharacterized protein LOC101207817 [Cucumis sativus]
trEMBL	tr\|A0A0A0LD83\|A0A0A0LD83_CUCSA	6.00E-98	Uncharacterized protein {ECO:0000313\|EMBL:KGN58889.1}
TAIR	AT3G53680	6.00E-82	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000280	298402	355057	+

Transcript Sequence
>GWHTAAEX010304 CCTTATGAATCATAAAGTTCATGTCTAGCTATCTGAAGAATCTGAATCCTAATCTCTTCATCTTAATTTAGCGGTTAATCACTCGATTCGTACTCGCCATTTGCAAAACAGCTCTTTTGCTGCTTTACAGTACACTTTAGAACAAAATTATCTGCACAGGGCTTGGACGCTGCTTCCCACCAAAGGATTTGAGAATGCAAATCAGTCTGCTAGGGTTTCGCCTTTTGTCTTCATGATTTAACAAGCGACGCAAAAATTCACTTGAGGTTTTACGATTGTGGCTGTTTTTCAGTCCCCCCTCACCTCGGTTTTAGAAGGAAAAGGTTCCTTCTTTACTTCAGTCGTCGTCGTAACGTCTCCAACAGACCCCGATTTCAAGAGAATGGTTAACGTGTATATTAGGAGGAAAAAGAAAATTATGTTATTTTATTCAAGGAGAAGAAGAGGGTATAGGGAGCAGGAACCGTCTCCTCCTCTCACTATAGAACTGATTGATTCTCTCAAGGAAAAGGATCAAAATAATGGCTTCTTCCCCAGTGATAAGGTTCTCGTCGACACTCTCAGTGACGGGCTTCCTGAAGCTTGCATATTTCAAACAAACCAAGAAAATTCAGATATTAATTTTGGGAGCGAGGCAATTGTGACCTCTATACAAATGGAAGAGAACATAGTCTCGATCACTGGTGGGCGTTCTTCTGAAGATGCTAAGAAGAGAGTACATATTGGTATCAAAATGCTTGATAATGAGCCTCTATTGAGTGTTATGGATGAACTTTCATCAAAAATATGTCTGCAAAGGAGACCTAGATCTGCTAGAAAATCTGCTTCATTATCTCAAAGAAGATGGAGCCTAAATGAATATAGAGCTTCAGATCATTCAAAACAGTTGTCTTCACACTTGGGGGAATCAACATCAGTCTGTTATGAAATTATGCCAAAAACTCCTATTAAAGAGGACAAGATATATAAGCCTACGCCCCAGAGCCTTGTTCATAATGTACACAAATTGCCTTTCTTAGAAATCAATGCAGTCTGCAGGGGTTGGAAAGGTAGCCCTGCGTTCTATTGTAAAAGAGGCAGAAGCAAATACCAAAAACCATTTTTGAATCTTCTACATGTGCTTCAAGCAGGGCTGAAATTGCCAAAGGGTCCTCGATCAACGAGAGTCAAGTCAAAGGTCAATCAAGCTTCTCGCAACTTAATCTTCTGTGATGTTGATCCACTGCACCGTCCTGCTTGCAAAAAAAGGGGAGTAGATATACAATTTGCTAAAGAATTTTCTTTCAAGGAATCAAGAGAGATAAATTCAACAAACCCTTGCCAATCTAAGACTGGATATGTTCTACTGAAGCCAAAAATCTCCAACATTCGTATTTGTTTGAAAAATGCCAAATTCTCAAGCAGGTGCATTCCAGATATTTCACTTTCAAATGCTAGTTTCTTATTGGCCGTTGGTGTGCTTGAAAAGCTCTTTGTAAACTACATGAAAGTTAAACTTCTTGGATGTATAAATGATCTTGGAACTACATGTGGCTGCTCATTGTGTCACTTCATGAAGGTGCTCTCACTGAATTTTGAAAAGCATTCGGGGACTTCATGTGTGAACCCAAATAATTGCATAAATGCCAATAACAAGATAGCTTTTTGTGCATTAGTTAAAGAAATGGGGAAAGTTCCTTTTGGACTATTTACCAGGGAATTAATTCAAAAGATGATTTGCTGTCGAATGAATAATATAAGTTTTTTTCCTCAAAAAGAATTTTATATTGCAAATGAGATTAATCCAAATATCGCTAGTTGCGGAAATGGAAAAAATCAACTCTCACATATTTTGCGTCATCGAAGAATTCTTTCAGAAAGGTTAATGTTGTCAGGCTCAGAGGAAAATTTACCTTTTCCTTCAAAAAGTGATGTAAAAGTTAAATTTCGAGGGGAAGCTGAGAAAACTATGAAGCACAGGGAACAAGAATTTCATCAGCAAATTTTTGAATTGCTTAATGATGGATCCAAATTGCTCTATTATTCTCATGGAAAGGTAGTTTTGGAAGGTTACAAGTTTGGAAAGAATATACTCTGTAGTTGCTGTAATGTTATGCTCAGTGCTTCTAAATTTGAAGCTCATGCTGGGCATGTAAAAAGAAGAAAGCCCTACCACTCCATATACACTTCTTATGGCAAATCTCTACACCAGATTACAGTGTTTTTATTACGTGATAAGAACTCATTTGATTTCAGCAATAAAGATCCATTTTTGACGCATAAAACTGAGGGTGAACCGTCCTTTGCTTTAAGATATCAAAATGCTTGTAATGCAGGTGAACAAAGTTCTACTACTGCTTTGAGTCCATCTGGCTTTCAACTGGTGAAACGTGTATTAGTTCCTTCTTGCATTTTAAGCAGCTGTATGCTTTGTGGGAATGGTGATGCCACTCTAAATTTTGGTAACATTTGTGACAGCACTATGTTGCTTTGTGGCCAATGTTGTAGAATGTTTCATGTTGGCTGTTTAAGGCATCAAGGAATATGCTGTATTAAGGCAAGGCCCAAGTTACCTGATATTTGGCTATGCGGCGATAATTGCAGGAAAGTTTACTCTGACCTTCTGAACTTTGTTAAAGAAGGGCCTACTGCTATCTCTGAGTCAATGTTAAATTCATTGCATAATTCTGTAAAAAGCACATTACTAGAGGAGACTAAAGTTGATGTTCATTGGCAAGTCTTGAGTGGCAGAATTCATGGTGAGAAAAGTAAATTATTTCTTCAACAAGCCACAGCAATTTTTCAAGAGGCATTTGGGGTTGTTTATAAAGGACATCGTGATGTGCTGTCCACCATGGTTCATGGTGAAAGAGGAGTCTCTGAATTTTTTGGAGGGATGTTTTGTGCTGCCTTAACCGTAAAATCCGTGATTATCTCAGTTGCGCTGCTTAGAGTGTTTGGAAATTACGTTGCAGAACTTCCACTTGTTGCAACATGCATGGAAAGGCGAAGAGAGGGTTTCTTCAGAATTCTATTTCTAAAAATTGAGGAAATGCTTAGTTTCATGAAGGTGAAAAACTTGATACTTCCTGCGGATGCTCATAGCCATTCTATGTGGGTGGAAAAATTTGGCTTTATTAATCTGAGTGCAGAAGAGATTCGAGAATATCAGATGAAACATAGGATATTGATGTTTGAGAATGCCACTGTGCTGCAGAAAGCACTTCCTTCCAAGTATTTTTCTGTTCATTTTTTTTGATATTATGGCTTGTGAGCTGTGAGCTCGATGAACTTTAACTTTAACATAGTTAAACTTTAACTAACTCTGACTTGACTCTTTGGCTTACGATATATTAAATATACCAAAATTCATGCA

Network for GWHGAAEX010304

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF16135.4	Jas	537	594	7.30E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.140
SRP064423	SRR2545915	Juvenile tuber	20.300
SRP108465	SRR5643513	five period of Gastrodia elata	12.540
	SRR5643514	five period of Gastrodia elata	16.190
	SRR5643515	five period of Gastrodia elata	12.400
	SRR5643524	five period of Gastrodia elata	13.510
	SRR5643525	five period of Gastrodia elata	13.040
	SRR5643528	five period of Gastrodia elata	9.230
	SRR5643658	five period of Gastrodia elata	13.510
	SRR5643659	five period of Gastrodia elata	11.490
	SRR5643660	five period of Gastrodia elata	14.550
	SRR5643661	five period of Gastrodia elata	12.000
	SRR5643662	five period of Gastrodia elata	14.500
	SRR5643663	five period of Gastrodia elata	15.810
	SRR5643664	five period of Gastrodia elata	15.760
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.390
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.860
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.640
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.080
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.920
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.270
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.860
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.320
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.200
SRP279888	Gastro	Gastrodia elata tuber	14.55
	Juven	Juvenile tuber	14.29
	Mother_Gastro	Mother tuber of Gastrodia elata	5.52
	Mother_Juven	Mother tuber of Juvenile	8.36