Detail information of GWHGAAEX010312/evm.TU.scaffold_29.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672181507|ref|XP_008810974.1|1.54E-74PREDICTED: double-stranded RNA-binding protein 1-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q6YW64|DRB4_ORYSJ2.00E-31Double-stranded RNA-binding protein 4
trEMBLtr|D7TSR3|D7TSR3_VITVI5.00E-72Putative uncharacterized protein {ECO:0000313|EMBL:CBI33535.3}
TAIRAT3G269329.00E-21dsRNA-binding protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000031690151703733+
Transcript Sequence

Network for GWHGAAEX010312

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00035.25dsrm33961.80E-09
PF00035.25dsrm1191791.90E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms166.320
SRR2545915Juvenile tuber134.170
SRP108465SRR5643513five period of Gastrodia elata42.320
SRR5643514five period of Gastrodia elata42.570
SRR5643515five period of Gastrodia elata43.160
SRR5643524five period of Gastrodia elata44.400
SRR5643525five period of Gastrodia elata51.740
SRR5643528five period of Gastrodia elata51.120
SRR5643658five period of Gastrodia elata51.340
SRR5643659five period of Gastrodia elata56.670
SRR5643660five period of Gastrodia elata64.430
SRR5643661five period of Gastrodia elata52.070
SRR5643662five period of Gastrodia elata57.450
SRR5643663five period of Gastrodia elata59.090
SRR5643664five period of Gastrodia elata51.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.630
SRR6049655Rhizomagastrodiae_C368-T10_good_148.950
SRR6049656Rhizomagastrodiae_C368-T07_good_147.840
SRR6049657Rhizomagastrodiae_C368-T07_good_149.020
SRR6049658Rhizomagastrodiae_C368-T04_good_151.010
SRR6049659Rhizomagastrodiae_C368-T04_good_147.910
SRR6049660Rhizomagastrodiae_C368-T01_good_150.420
SRR6049661Rhizomagastrodiae_C368-T04_good_151.070
SRR6049662Rhizomagastrodiae_C368-T01_good_137.940
SRR6049663Rhizomagastrodiae_C368-T01_good_148.550
SRR6049664Rhizomagastrodiae_C368-T10_good_143.510
SRR6049665Rhizomagastrodiae_C368-T10_good_143.510
SRP279888GastroGastrodia elata tuber 75.90
JuvenJuvenile tuber62.17
Mother_GastroMother tuber of Gastrodia elata 36.47
Mother_JuvenMother tuber of Juvenile 45.50