Detail information of GWHGAAEX010314/evm.TU.scaffold_29.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33033.00E-35Predicted alpha-helical protein, potentially involved in replication/repair
nrgi|672163062|ref|XP_008801362.1|2.51E-59PREDICTED: DNA replication complex GINS protein PSF1 isoform X3 [Phoenix dactylifera]
trEMBLtr|M0SVP9|M0SVP9_MUSAM4.00E-59Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P04700_001}
TAIRAT1G801903.00E-35partner of SLD five 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000031894191904928+
Transcript Sequence

Network for GWHGAAEX010314

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.570
SRR2545915Juvenile tuber60.670
SRP108465SRR5643513five period of Gastrodia elata19.170
SRR5643514five period of Gastrodia elata14.510
SRR5643515five period of Gastrodia elata16.780
SRR5643524five period of Gastrodia elata17.320
SRR5643525five period of Gastrodia elata21.210
SRR5643528five period of Gastrodia elata23.150
SRR5643658five period of Gastrodia elata27.920
SRR5643659five period of Gastrodia elata29.100
SRR5643660five period of Gastrodia elata31.990
SRR5643661five period of Gastrodia elata31.540
SRR5643662five period of Gastrodia elata35.490
SRR5643663five period of Gastrodia elata33.610
SRR5643664five period of Gastrodia elata32.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.880
SRR6049655Rhizomagastrodiae_C368-T10_good_112.240
SRR6049656Rhizomagastrodiae_C368-T07_good_118.720
SRR6049657Rhizomagastrodiae_C368-T07_good_116.220
SRR6049658Rhizomagastrodiae_C368-T04_good_19.330
SRR6049659Rhizomagastrodiae_C368-T04_good_17.280
SRR6049660Rhizomagastrodiae_C368-T01_good_18.070
SRR6049661Rhizomagastrodiae_C368-T04_good_17.610
SRR6049662Rhizomagastrodiae_C368-T01_good_18.620
SRR6049663Rhizomagastrodiae_C368-T01_good_111.160
SRR6049664Rhizomagastrodiae_C368-T10_good_112.290
SRR6049665Rhizomagastrodiae_C368-T10_good_112.290
SRP279888GastroGastrodia elata tuber 21.26
JuvenJuvenile tuber14.95
Mother_GastroMother tuber of Gastrodia elata 13.22
Mother_JuvenMother tuber of Juvenile 14.60