Detail information of GWHGAAEX010340/evm.TU.scaffold_29.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG23465.00E-129Uncharacterized conserved protein
nrgi|672177125|ref|XP_008808648.1|0PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Phoenix dactylifera]
trEMBLtr|M0TN43|M0TN43_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P06400_001}
TAIRAT4G020305.00E-129Vps51/Vps67 family (components of vesicular transport) protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003147417344816966-
Transcript Sequence

Network for GWHGAAEX010340

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08700.10Vps51501344.10E-24
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.720
SRR2545915Juvenile tuber25.560
SRP108465SRR5643513five period of Gastrodia elata24.500
SRR5643514five period of Gastrodia elata27.350
SRR5643515five period of Gastrodia elata24.470
SRR5643524five period of Gastrodia elata28.880
SRR5643525five period of Gastrodia elata14.240
SRR5643528five period of Gastrodia elata14.360
SRR5643658five period of Gastrodia elata13.280
SRR5643659five period of Gastrodia elata15.470
SRR5643660five period of Gastrodia elata15.800
SRR5643661five period of Gastrodia elata17.960
SRR5643662five period of Gastrodia elata20.770
SRR5643663five period of Gastrodia elata21.840
SRR5643664five period of Gastrodia elata19.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.710
SRR6049655Rhizomagastrodiae_C368-T10_good_126.490
SRR6049656Rhizomagastrodiae_C368-T07_good_121.440
SRR6049657Rhizomagastrodiae_C368-T07_good_120.750
SRR6049658Rhizomagastrodiae_C368-T04_good_116.760
SRR6049659Rhizomagastrodiae_C368-T04_good_119.500
SRR6049660Rhizomagastrodiae_C368-T01_good_119.300
SRR6049661Rhizomagastrodiae_C368-T04_good_116.870
SRR6049662Rhizomagastrodiae_C368-T01_good_121.040
SRR6049663Rhizomagastrodiae_C368-T01_good_119.200
SRR6049664Rhizomagastrodiae_C368-T10_good_126.400
SRR6049665Rhizomagastrodiae_C368-T10_good_126.400
SRP279888GastroGastrodia elata tuber 21.17
JuvenJuvenile tuber23.96
Mother_GastroMother tuber of Gastrodia elata 25.23
Mother_JuvenMother tuber of Juvenile 22.35