Gene detail

Detail information of GWHGAAEX010341/evm.TU.scaffold_29.74

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4346	6.00E-25	Uncharacterized conserved protein
nr	gi\|743765346\|ref\|XP_010912892.1\|	0	PREDICTED: telomere length regulation protein TEL2 homolog [Elaeis guineensis]
Swissprot	tr\|Q0DZT4\|P2C19_ORYSJ	3.00E-10	Probable protein phosphatase 2C 19
trEMBL	tr\|M0TWS4\|M0TWS4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P02170_001}
TAIR	HS7705346	6.00E-25	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000031	4895273	4944153	+

Transcript Sequence
>GWHTAAEX010341 GGCACCCCCTACTACTCGTTACATTGGCAGGCACTCCCCTCCTTTCCTAACAGTGCTCGGAAGATCCGTAATATCGAAATCACGGGTTCTGAACGTCGGAGCAACGGCTACAATGTCGAATGGGGACGAGGGCACCGCACCAGGCGGGTTGTTGGACGATGAACTAGATGCCGCAATCCTGCTGATGGTGGAAGAGGTATCATGTGAGATTAATTCCGCGAAGCTCGTTGACCAAGTGATCTGCGCCCTCTATTCCCTCGCCGCTCGTCTTTTCCCAATCGATTCTTCCGTTATCTTAGCTGCTGTTGACCCATTGTACGCTAGTCAGGTGCTAGCTGCAAAGGTTTCAACTGATGATTATGAAAGGGACCAGTGCAAGCATGTTTTCTACAATGGTGCAGCCTTTCCTGCAATGGCTAGGATACTTTTATACAATGTCACTTCTCACTGGCTGAGTTTATTTTCTTCTTTAGCACGCAAACTTGTTTATGATTCATTCTTTTTAGAAGGCCCCTCAGCTGAGATCATTCAGACCTTGGTCCCTGTTTTAAGCCAAGATGGAAGCATTGATAAACTCAAGCTCAAGCTCATATATTCAAATGTTGAAAGGATATTGGTTTTGTGCTTACTTAAAAAAAGAGGAGTGCAGCGTATGGTTTCAGATTTTGATTTTCCACACAAAGGAGGTGGGAATACTGGTGAATTTTTAAAAACAGATAAATCAAGTATACCGAGAATAGCACAACTTCTCGTTTCCATTCCTGACAAAGCAACATTGGATGCTGTACCTTTACTTTTATCACACTACTTTTTTCAAGGCATTGTCATTCAACTTCTTGATGGAGCTGAAATAAGGGTTTTGGAATTATATAGTAGAGTGGATACATTCAATGCAACAACCTTGGGTGGTAGTCTTCTTTTTGTTGGAGAAACTTTTTCACGCATATGCAGACGCGGATCTGCAGGCATTCTTGTAGATGAAATAATTCCCAGAATTCTTGATGTAGTTCAAAATTGCTTATCGGCAAAATCTGAGTTTGCTATTTCTACCATGTTCGAAAAAACTCCAAAATCTATGTTTTGGCTGAGGATAGTTGAAACAATTAAAGACAAGTATGCTGTAGAAAGATTGGCTGAAGTGTTACTTCGGCAGTTGTCAACTAAAAGAATCACTGAAGTGGAAGCTTATTGGATTCTCTGGGTGCTTTTTAATCGATGCTTAGGACAAGAAAACACCATGAGGGCAATTTTTGTGGACAAATTTTTGATTTGGAAAGTCTTTCCCGTGTGCTGCCTGAGATGGATCATACAGCTCTCTATTCTTGAGCAAGCACCGGTTGATGATGCGTGCTCAACCTATTTAAAGTCTAAAAGGTTCTTTGACATGGTGCAACGCTTAGTTACTCTGTGGTCTAAACGTGATTTTGTTCAGACAGCTCATATAGAGCAGCAAGCTTACATTACAGCAGCTGTTGGTTTGTGTCTGGAGAAGATGACCAATGAAGAACTTGAAACAACACAAGATGTATTGTCATCTATTCTTCAAGGAGTTAGCTGTAGGTTAGAGAGCCCAATTCATTTAATTCGAAAAATGGGCTGTTCTATAGCTTTAGCCTTCTCTAGAGTTGTGAATCCTGCAAATCCTCTCTATCTTGAGGATATCTGCTGTGAAAGTATTGATTGGGATTTTGGGCTTATTTCTCCGACCAAAAAGCCACAAGAAGCAGATGGAGTTTTTATTGACAATGCAGATTTAAAAAATTCACATAGAGGAATAAATCGTGCATATTTTGATAAGAAACACAAGAATGTGAAAGACAAAAAAAGACAAAGTAAAATCAAGATTTTAGAGGTGAGAAAAAATGCTCCTGATATGAGTATTCATCAAACTTTGCTTGATGAAAGCATTGATGACGAAGAAGCCAGGGATGATGAAAGCAGCCATTCTGAAAGTTCAAGTGACTCATCCTTACAGCCTTATGATCTTTCTGATGATGATGCTGATTTGCAAAAAGGGTTTTCACAATTGGCTGATGTTTGTGCAGCTTTAAGAAAGTCCGATGATCCTGAAGGTATTGAGCGAGCACTTGATGTTGCTGAAAAGCTCATTAGAGCATCTCCTGATGAACTTCAGCATATTTCGGGTGATCTTGTTCGTGCTTTAGTGCATGTACGTTGTGCAGATGTAGCTGTCGAAGGACAAGAAGATGTGAGTGAGGAGAGGAGGCAAAGGGCTCTAGTTGCTTTGATTGTGACTTGCCCATTTGAGTCTGTGGGTGTTCTTACAAAGCTACTTTATTCGCCAAATGTGGATGTTAGCCAGCGAATATTAGTATTAGATGCTATGACAGAGGCGGCTCAGGAGCTTGCTAGTGCTACGTTCATTACAATGGTTGATCAGTCAAAGAGTTTTATTTCTTCTGTCCCAGCAAATCAGCCATGGTTTGTTCCAAACCACAGTGGGCCTCCTGGAGCAGGCCCCTGGAAGGAGGTTGAGGAATATTTTAGTAGCACTCTAAGATATGAGAGAGTACTTCCATCTAGACCAGGCCAAGTTATGAAAGGGAAATCACGAAGATGGAGCATTCAAAAAACAAGTGAATCCCAATTAAAGCACAGTAAAAACAAATTTCCGTTGTATGCTGCTGCTTTTATGCTCCCTGCAATGCAAGGATATGACAAAAGGGGTCATGGCGTTGATTTGCTGAACAGGGATTTTATTGTACTTGGAAAATTGATTCACATGCTTGGTGTCTGCATGAATTGCATTGCTATGCATCCAGAAGCAGCAGCCTTGGCTTCCCATCTTCTTGACATGCTAAAATCTAGGGCTGTAGCTCATCATGCAGAAGCATATGTTAGAAGATCTGCCCTTTTTGCAGCCACAAGTATTTTAATGGCTGTGCATCCATCCAATGTGGCATTTTCGTTGATTGAAGGCAGTCATGAAATTTCTAGTGGACTTGAATGGATTCGCATATGGGCTCTTCATATTTCTGAATCTGACCCAGATACTGATTGTTCAGCTATGGCCATTAGATGTCTCCAACTCCATTCTGAATTGGCTCTTCAAACTTCTCGCTTTCTTGAAACTGCACAATCTCATAGGCCAAAAGTTGGTTCCTTAATATCAAAGATGAAAGACATTATAATTCCTTCCTCAAACAATTGACAAGCTGTGTACTATACTATGTTTTTTTCACTTGTTAATACCGACTTATTAATATTTTGCTTCCAATTTTCATGCGCTCTAGCTTGAGCTCATGTTCATAATTGTGATAAATTATGTCAATTAGTTCTTGAGCAAATGTTTATCAAAACTTGGCAAGTTGAGTTGCTTTTTCCTAACTTTTTAACTAGTTGCTTTTGTATTTCCATTCTTGACAATTTTTGACTCTTTTGCAATGGAGAAACACAGAATCAATCTTTCTTATTATAAATATTTTG

Network for GWHGAAEX010341

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10193.8	Telomere_reg-2	639	749	1.50E-24

Protein Sequence

>GWHPAAEX010341
MSNGDEGTAPGGLLDDELDAAILLMVEEVSCEINSAKLVDQVICALYSLAARLFPIDSSVILAAVDPLYASQVLAAKVSTDDYERDQCKHVFYNGAAFPAMARILLYNVTSHWLSLFSSLARKLVYDSFFLEGPSAEIIQTLVPVLSQDGSIDKLKLKLIYSNVERILVLCLLKKRGVQRMVSDFDFPHKGGGNTGEFLKTDKSSIPRIAQLLVSIPDKATLDAVPLLLSHYFFQGIVIQLLDGAEIRVLELYSRVDTFNATTLGGSLLFVGETFSRICRRGSAGILVDEIIPRILDVVQNCLSAKSEFAISTMFEKTPKSMFWLRIVETIKDKYAVERLAEVLLRQLSTKRITEVEAYWILWVLFNRCLGQENTMRAIFVDKFLIWKVFPVCCLRWIIQLSILEQAPVDDACSTYLKSKRFFDMVQRLVTLWSKRDFVQTAHIEQQAYITAAVGLCLEKMTNEELETTQDVLSSILQGVSCRLESPIHLIRKMGCSIALAFSRVVNPANPLYLEDICCESIDWDFGLISPTKKPQEADGVFIDNADLKNSHRGINRAYFDKKHKNVKDKKRQSKIKILEVRKNAPDMSIHQTLLDESIDDEEARDDESSHSESSSDSSLQPYDLSDDDADLQKGFSQLADVCAALRKSDDPEGIERALDVAEKLIRASPDELQHISGDLVRALVHVRCADVAVEGQEDVSEERRQRALVALIVTCPFESVGVLTKLLYSPNVDVSQRILVLDAMTEAAQELASATFITMVDQSKSFISSVPANQPWFVPNHSGPPGAGPWKEVEEYFSSTLRYERVLPSRPGQVMKGKSRRWSIQKTSESQLKHSKNKFPLYAAAFMLPAMQGYDKRGHGVDLLNRDFIVLGKLIHMLGVCMNCIAMHPEAAALASHLLDMLKSRAVAHHAEAYVRRSALFAATSILMAVHPSNVAFSLIEGSHEISSGLEWIRIWALHISESDPDTDCSAMAIRCLQLHSELALQTSRFLETAQSHRPKVGSLISKMKDIIIPSSNN

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K11137	TELO2, TEL2	Fanconi anemia pathway	map03460
K11137	TELO2, TEL2	mTOR signaling pathway	map04150

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.930
SRP064423	SRR2545915	Juvenile tuber	15.620
SRP108465	SRR5643513	five period of Gastrodia elata	11.810
	SRR5643514	five period of Gastrodia elata	11.190
	SRR5643515	five period of Gastrodia elata	10.510
	SRR5643524	five period of Gastrodia elata	11.020
	SRR5643525	five period of Gastrodia elata	4.280
	SRR5643528	five period of Gastrodia elata	3.760
	SRR5643658	five period of Gastrodia elata	3.650
	SRR5643659	five period of Gastrodia elata	10.130
	SRR5643660	five period of Gastrodia elata	12.380
	SRR5643661	five period of Gastrodia elata	10.990
	SRR5643662	five period of Gastrodia elata	12.210
	SRR5643663	five period of Gastrodia elata	12.430
	SRR5643664	five period of Gastrodia elata	11.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.290
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.870
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.600
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.570
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.150
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.790
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.200
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	15.870
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	14.100
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	14.100
SRP279888	Gastro	Gastrodia elata tuber	20.48
	Juven	Juvenile tuber	23.10
	Mother_Gastro	Mother tuber of Gastrodia elata	14.13
	Mother_Juven	Mother tuber of Juvenile	20.39