Detail information of GWHGAAEX010344/evm.TU.scaffold_29.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743765285|ref|XP_010912858.1|8.03E-95PREDICTED: F-box protein SKIP14-like [Elaeis guineensis]
Swissprottr|Q9LU91|SKI14_ARATH1.00E-54F-box protein SKIP14
trEMBLtr|M0S9T9|M0S9T9_MUSAM5.00E-84Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P20980_001}
TAIRAT3G260004.00E-54Ribonuclease inhibitor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003151162345118662-
Transcript Sequence

Network for GWHGAAEX010344

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.600
SRR2545915Juvenile tuber15.550
SRP108465SRR5643513five period of Gastrodia elata18.180
SRR5643514five period of Gastrodia elata12.980
SRR5643515five period of Gastrodia elata29.990
SRR5643524five period of Gastrodia elata11.750
SRR5643525five period of Gastrodia elata11.320
SRR5643528five period of Gastrodia elata9.910
SRR5643658five period of Gastrodia elata10.750
SRR5643659five period of Gastrodia elata53.020
SRR5643660five period of Gastrodia elata51.340
SRR5643661five period of Gastrodia elata54.840
SRR5643662five period of Gastrodia elata25.960
SRR5643663five period of Gastrodia elata20.510
SRR5643664five period of Gastrodia elata30.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.650
SRR6049655Rhizomagastrodiae_C368-T10_good_110.430
SRR6049656Rhizomagastrodiae_C368-T07_good_126.840
SRR6049657Rhizomagastrodiae_C368-T07_good_119.930
SRR6049658Rhizomagastrodiae_C368-T04_good_113.960
SRR6049659Rhizomagastrodiae_C368-T04_good_19.000
SRR6049660Rhizomagastrodiae_C368-T01_good_118.050
SRR6049661Rhizomagastrodiae_C368-T04_good_116.440
SRR6049662Rhizomagastrodiae_C368-T01_good_115.920
SRR6049663Rhizomagastrodiae_C368-T01_good_118.730
SRR6049664Rhizomagastrodiae_C368-T10_good_115.220
SRR6049665Rhizomagastrodiae_C368-T10_good_115.220
SRP279888GastroGastrodia elata tuber 11.31
JuvenJuvenile tuber35.08
Mother_GastroMother tuber of Gastrodia elata 21.52
Mother_JuvenMother tuber of Juvenile 13.40