Detail information of GWHGAAEX010346/evm.TU.scaffold_29.83


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34358.00E-45Mitochondrial/chloroplast ribosomal protein L54/L37
nrgi|747098601|ref|XP_011097320.1|2.87E-53PREDICTED: 54S ribosomal protein L37, mitochondrial [Sesamum indicum]
trEMBLtr|A0A061EDL2|A0A061EDL2_THECC6.00E-51Mitochondrial ribosomal protein L37 isoform 1 {ECO:0000313|EMBL:EOY02678.1}
TAIRAT3G017408.00E-45Mitochondrial ribosomal protein L37

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003152466875247085+
Transcript Sequence

Network for GWHGAAEX010346

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08561.9Ribosomal_L3755912.60E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms59.690
SRR2545915Juvenile tuber68.200
SRP108465SRR5643513five period of Gastrodia elata31.340
SRR5643514five period of Gastrodia elata31.460
SRR5643515five period of Gastrodia elata30.130
SRR5643524five period of Gastrodia elata26.510
SRR5643525five period of Gastrodia elata40.110
SRR5643528five period of Gastrodia elata32.200
SRR5643658five period of Gastrodia elata34.250
SRR5643659five period of Gastrodia elata33.740
SRR5643660five period of Gastrodia elata45.870
SRR5643661five period of Gastrodia elata57.240
SRR5643662five period of Gastrodia elata58.720
SRR5643663five period of Gastrodia elata44.550
SRR5643664five period of Gastrodia elata62.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.680
SRR6049655Rhizomagastrodiae_C368-T10_good_122.710
SRR6049656Rhizomagastrodiae_C368-T07_good_133.740
SRR6049657Rhizomagastrodiae_C368-T07_good_136.670
SRR6049658Rhizomagastrodiae_C368-T04_good_139.500
SRR6049659Rhizomagastrodiae_C368-T04_good_135.990
SRR6049660Rhizomagastrodiae_C368-T01_good_124.420
SRR6049661Rhizomagastrodiae_C368-T04_good_140.500
SRR6049662Rhizomagastrodiae_C368-T01_good_147.950
SRR6049663Rhizomagastrodiae_C368-T01_good_141.870
SRR6049664Rhizomagastrodiae_C368-T10_good_138.480
SRR6049665Rhizomagastrodiae_C368-T10_good_138.480
SRP279888GastroGastrodia elata tuber 48.91
JuvenJuvenile tuber31.30
Mother_GastroMother tuber of Gastrodia elata 28.71
Mother_JuvenMother tuber of Juvenile 19.57