Gene detail

Detail information of GWHGAAEX010349/evm.TU.scaffold_29.86

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|189501798\|ref\|YP_001957515.1\|	6.00E-12	hypothetical protein Aasi_0363 [Candidatus Amoebophilus asiaticus 5a2]
KOG	KOG0504	6.00E-163	FOG: Ankyrin repeat
nr	gi\|743814515\|ref\|XP_010930059.1\|	0	PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Elaeis guineensis]
Swissprot	tr\|Q9C7A2\|Y3236_ARATH	5.00E-13	Ankyrin repeat-containing protein At3g12360
trEMBL	tr\|F6I5L6\|F6I5L6_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB62234.1}
TAIR	AT3G01750	6.00E-163	Ankyrin repeat family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000031	5376234	5397165	+

Transcript Sequence
>GWHTAAEX010349 CTCAGAAGCATTGGGCTAAAAATCTCGACTTTTTCCAATTCGAAAAGCTCCTTTTACACGCTCCAATCTCTTTCAGGCTTCCCTCCTCCTCCTTAAGACTCGCGCTACCGCCCTCTCTCAACAGACTTCTGCTACTGCTTGATTTGCATCAGGTTCCATTTCCATATCTTTGCCCTTCTTATACTAGTGATTTAAGATCTTGTTAGAAATGTCTTCTTCCTTTCTTCCTCTCCACTGGGAGAGCACTGGGAACAAGTGGTGGTGTGCTTCACCCATAGACTTGGCAGCCGCCAATGGACACTATGATCTTGTTCTAGAGCTCCTTCGTCTTGACATGAACCTCCTAATTAAGCTCACTTCCCTTCGCCGGATCCGACGGCTTGAGAGCTTATGGGATGATGACAGCCACTTTGTTCATGCCGCGAAATGCCGTTCCTTTGTTGCCCAAAACCTCCTACTTGATTGTGAAATCAGGAACAGTAGGAACAGCCTGATTCGAGCAGGCTATGGAGGGTGGCTTCTATACACGGCTGCCTCAGCCGGTGACAGTGATTTCGTTGAAGAGCTGCTTGGGAGAGAGCCGCTATTAGTATTTGGAGAAGGAGAATATGGCATTGCTGATATACTTTATGCAGCTGCACGGAGCAAGAACATTGAGGTGTTCAAGACTATATTTGAGCGTGCGATATCTCCCTGTATGTTTAGTGATGGAGGAAGGGTAGGAGATGGGTCGCCGACTGTGGGGAGTAATATCTCATTTTTCAGGTGGGAGATAGTCAACAGGGCAGTTTTTGCTGCGGCAAGGGGAGGGAACCTGGAGGTGTTGATGGAGCTACTTATGGATTGTTCTGATGTTTTGGCTTTTAGAGATAATCATGGAGCTACCATTTTTCATGCTTCAGCTGGAAGTGGGCAAGTTGAGATTGTCAATCATCTCATCACAACCTTCAATATCATCGAAAGCCGAGACAATCGAGGCAACACAGTGCTGCATATTGCTGCATTTCAAGGGCATCTGCGTGTTGTACAGGCCTTGATCTGTGCTTCTCCAACTCTATCTTATTCAACGAACAATGACGGAGAAACTTTCCTTCATATGGCAATCACCGGCTTTCAGACATCGGGATTTCGTCGTCTTGACCACCAATTGGAGCTGATGCGTCGTCTGATCTCGGGCGACATTACAAACATTCACAAAATCATCAATATACAGAATTGCGACGGAAGAACCGTGCTGCATACTGCTGTTGTTGGCAGCTTGCAATCCGACCTTGTGGAGCTCCTTATGACTGTTCCATCCATCGACCTTAGCATTCAGGATATCGACGGCATGACTCCGCTCGACTTGCTCTGTGGTCAAGTCTGCTCCGTTGCATCCGATTTACTTATAAAAGAGTTTATCTTGGCCGGCGGGATATCTAGTTCGAATATTTCAAGGATTCAATCCACTATCCCTTCTCGGTTGAAAAAGCAGTCTGTCACCGGGAACAGCCCAGGCACCTCCTTCAGGATCACAGATGCGGAGATATTCTTATGTACTGGAATTGAGACAGCAGCAGCCAGTGTGGGGCTGAGCTCATGCTCCAGTATCAGCAAGAGTGAGAGTGAGCATCCCACACGAAAGAAGAAACCTTCAAGATCTCTCAGCACTGCTGCAAGGAAACTCAGGGTACTTTTTGGGCTTTCTCACATTAAAGAGAAGAAGATCAACGACGACTATCGTGATTCTTTCAGCTCGGTCATGAAATGGAGCGAACAAGAGGAGACATTGACGCCCCTCAGACAAACTTATTCGAACAGCAAGCTGCTGTCCGCAGAGAGAACATCAATGCCTAGCCCGGAAACAAAGAGTAGGTTTGCAGCAAGTTTAATGCATGGAGTCTTCCGGGCAATGCCACGGCCATCATATTATTCGCAGCCACAGACTCCCGAAAGCCCGTTTTCGTGTTCCCAGGACTCTTCGCCGCTGTCTGTGAAGCAGAAGGGCACGCCAATCGATAACAACGGGTATGCCGTTGGTACCAATCGTTTGGTTATTTCGAGGAGTTTGTTGAAGAAGTCGGGTTTGATGAATGCAAGGCTTATGAGCAAGTTCTTCTGTGGTGAGGCCAATGGCATGGAAGCAAAGAGCTCATCTGTTGTCAGCAGGAGCCATGGTCAGTGTGTTCCTCCTGTGGGCTGATATGAAGCTATGATGATGATAGCGTTTGAATTTGAGGTCAAATACAGTGCGAACTATAGATGGCAAAAATCTTTTTTGCTGAGATAAAGGTAAATGTAATGTAAAGGCTATTGAGTTGGATTTTTTGTATTTTGATATAAAGCTTATTGCTGCTTACTTCTAAACCCTTCAATTCTACAACTTGCCTTTTTTTTTTCTTCTCATTGCTAGAATCCTTAGCCATAGTTACAGCTTCCAATTTAAGCACTTTCCTGAGCTGATTTTTGGAAGAAACCCTACAAGACCAGCTATATATTATATGGGGCAGAATGTTG

Network for GWHGAAEX010349

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12796.6	Ank_2	196	279	1.30E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	33.870
SRP064423	SRR2545915	Juvenile tuber	21.570
SRP108465	SRR5643513	five period of Gastrodia elata	16.660
	SRR5643514	five period of Gastrodia elata	16.900
	SRR5643515	five period of Gastrodia elata	17.980
	SRR5643524	five period of Gastrodia elata	16.110
	SRR5643525	five period of Gastrodia elata	21.740
	SRR5643528	five period of Gastrodia elata	26.110
	SRR5643658	five period of Gastrodia elata	20.790
	SRR5643659	five period of Gastrodia elata	21.730
	SRR5643660	five period of Gastrodia elata	24.790
	SRR5643661	five period of Gastrodia elata	22.150
	SRR5643662	five period of Gastrodia elata	27.150
	SRR5643663	five period of Gastrodia elata	24.130
	SRR5643664	five period of Gastrodia elata	27.190
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	18.060
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	18.160
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.970
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.450
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	22.180
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.610
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	18.910
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.190
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	19.080
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	21.330
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	21.330
SRP279888	Gastro	Gastrodia elata tuber	27.66
	Juven	Juvenile tuber	23.21
	Mother_Gastro	Mother tuber of Gastrodia elata	22.06
	Mother_Juven	Mother tuber of Juvenile	19.42