Detail information of GWHGAAEX010355/evm.TU.scaffold_29.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47057.00E-13Uncharacterized conserved protein
nrgi|743813885|ref|XP_010929856.1|1.21E-124PREDICTED: ribonuclease H2 subunit B isoform X1 [Elaeis guineensis]
trEMBLtr|M0RIW3|M0RIW3_MUSAM4.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P16880_001}
TAIR72929087.00E-13Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003160565926113206+
Transcript Sequence

Network for GWHGAAEX010355

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09468.9RNase_H2-Ydr279112711.40E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10744RNASEH2B DNA replication map03030

Gene Ontology

GO term OntologyName
GO:0032299Cellular Componentribonuclease H2 complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.070
SRR2545915Juvenile tuber32.230
SRP108465SRR5643513five period of Gastrodia elata24.320
SRR5643514five period of Gastrodia elata22.960
SRR5643515five period of Gastrodia elata23.740
SRR5643524five period of Gastrodia elata21.430
SRR5643525five period of Gastrodia elata20.650
SRR5643528five period of Gastrodia elata18.470
SRR5643658five period of Gastrodia elata15.510
SRR5643659five period of Gastrodia elata21.090
SRR5643660five period of Gastrodia elata25.090
SRR5643661five period of Gastrodia elata24.470
SRR5643662five period of Gastrodia elata24.010
SRR5643663five period of Gastrodia elata24.200
SRR5643664five period of Gastrodia elata24.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.900
SRR6049655Rhizomagastrodiae_C368-T10_good_114.420
SRR6049656Rhizomagastrodiae_C368-T07_good_120.810
SRR6049657Rhizomagastrodiae_C368-T07_good_125.320
SRR6049658Rhizomagastrodiae_C368-T04_good_118.900
SRR6049659Rhizomagastrodiae_C368-T04_good_123.740
SRR6049660Rhizomagastrodiae_C368-T01_good_119.910
SRR6049661Rhizomagastrodiae_C368-T04_good_120.580
SRR6049662Rhizomagastrodiae_C368-T01_good_117.100
SRR6049663Rhizomagastrodiae_C368-T01_good_115.920
SRR6049664Rhizomagastrodiae_C368-T10_good_117.420
SRR6049665Rhizomagastrodiae_C368-T10_good_117.420
SRP279888GastroGastrodia elata tuber 24.98
JuvenJuvenile tuber24.71
Mother_GastroMother tuber of Gastrodia elata 13.87
Mother_JuvenMother tuber of Juvenile 16.06