Detail information of GWHGAAEX010363/evm.TU.scaffold_290.3
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383459745|ref|YP_005373734.1| | 2.00E-32 | sodium/hydrogen exchanger [Corallococcus coralloides DSM 2259] |
| KOG | KOG1650 | 3.00E-130 | Predicted K+/H+-antiporter |
| nr | gi|743831507|ref|XP_010934711.1| | 1.35E-174 | PREDICTED: cation/H(+) antiporter 15-like [Elaeis guineensis] |
| Swissprot | tr|Q9SIT5|CHX15_ARATH | 8.00E-131 | Cation/H(+) antiporter 15 |
| trEMBL | tr|M0SDQ8|M0SDQ8_MUSAM | 4.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P11410_001} |
| TAIR | AT2G13620 | 3.00E-130 | cation/hydrogen exchanger 15 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000338 | 49119 | 52306 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010363
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00999.20 | Na_H_Exchanger | 53 | 428 | 7.60E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0006812 | Biological Process | cation transport |
| GO:0015299 | Molecular Function | solute:proton antiporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.490 |
| SRR2545915 | Juvenile tuber | 18.790 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.370 |
| SRR5643514 | five period of Gastrodia elata | 27.130 | |
| SRR5643515 | five period of Gastrodia elata | 20.180 | |
| SRR5643524 | five period of Gastrodia elata | 25.410 | |
| SRR5643525 | five period of Gastrodia elata | 8.180 | |
| SRR5643528 | five period of Gastrodia elata | 7.640 | |
| SRR5643658 | five period of Gastrodia elata | 12.190 | |
| SRR5643659 | five period of Gastrodia elata | 61.990 | |
| SRR5643660 | five period of Gastrodia elata | 56.890 | |
| SRR5643661 | five period of Gastrodia elata | 69.410 | |
| SRR5643662 | five period of Gastrodia elata | 50.890 | |
| SRR5643663 | five period of Gastrodia elata | 64.200 | |
| SRR5643664 | five period of Gastrodia elata | 46.480 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 29.620 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.040 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 28.240 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 31.690 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 20.260 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 21.950 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.680 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.680 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 19.510 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 18.150 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 19.380 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 19.380 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 36.15 |
| Juven | Juvenile tuber | 28.65 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.04 | |
| Mother_Juven | Mother tuber of Juvenile | 10.23 |