Gene detail

Detail information of GWHGAAEX010375/evm.TU.scaffold_290.16

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672140342\|ref\|XP_008793972.1\|	1.87E-44	PREDICTED: uncharacterized protein LOC103710131 [Phoenix dactylifera]
trEMBL	tr\|A0A067DCK3\|A0A067DCK3_CITSI	7.00E-36	Uncharacterized protein {ECO:0000313\|EMBL:KDO40583.1}
TAIR	AT3G52240	1.00E-17	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000338	200728	224199	+

Transcript Sequence
>GWHTAAEX010375 AGGGCTGCGTCGCGTCCTCCGCGCAGCTAGCAGCCCAGTAAGAAGCTTCTCCTTCTGCGATGGCGAAGTGGTTTTATCGCTGAGGAAGCTAAAATACGGAATCCGATCTTGATCGAAGCAGGTCATGTGCTCAGATGCGTTCAAATAAGGTCGAACCGAACTTACATTAAAGGACCTATCCGGCCAGCACTACCATCCGGTGGGTCCGTATGTGCTCATACGCTCGCCCAAATGTGACCAGAGGACCCCAAGAACAAGCTTGGGCTGCATGTGAAGATCGTTGCTTGTTCATTTTATCGATTTGTATGAGCGATGCATTGGCACCACTGCTCTTACATGTAATATCATCACACAACATATCTCTTTTGTTGCTCCTGCGTACTCTTATTTTTCTGAAGGTAGTTTATTGAACTGTTGAGCCAGTCATAGAAGCAAACAAAGAAGCTTAGAGGCATTGGATCTCAATCTTTCATTAGTTTGGTGGATAGCAAGGGATGCATATAGAGATAATGCAGTTTCTACTTAAAACCAGTTGAACAGAATATCAGTACATTCTAGAGGAAACAATAGAGTAAGGGTAATCCCATGGATGAGAAAACAACTATGACTGTAGAGTTTCTTCGAGCCAGATTACTTTCTGAAAGAATTGTTTCTAAGACTGCAAGACAAAGAGCTGAGATACTGGCTCGAAGGGTTATTGAATTAGAAGAACAGTTAAGGATAGTGAATATCCAGAGAAAAAAAGCTGAGAAGGCAACAGAAGAAATTATATCTATTCTTGAGACTCAAGGGATCTCATACATTTCTGGCTTAACTTATTCGATCATTGATCGAGAGGTCAATCAATGCAATGTTGAAGAGGAAAATCAGTGTATAATCAGTGAGAATGTTAAAGAGAATGATTTTCTCTCAGCCTCCAAAATAAATAGAAGTATGGTTGATAATGGCTTGTTGTGTTCAAATATTGGGTGTCTTCCCTCCAATTGCAATTGCTCATCTTGGAAAATTAGTAGCCTAGACTCTCAGGAGAAGCAGAATACAAAGCAAAATAGGCAAATACAGAGCAGCAACTTTATCACTTCTGTCAAATCCCCTCAGAAATTCTCTGGAAAATCATTTCACATGATAAAAAGATCAGCTTCAGAGAACGAACTACTGAAACCTGCTCTTCTTGTAGCTTTTGGAAATGAAGTGGCTGCACATCTTGATGATTTTGATGAGAAACATGAATGTCCTTTGGAAGTTTCTGAAAACACGATGGACAAATTTTCTGTTGATCCTTCTTTTGCTCTTTGTCCTGATGGTCAAAATACAGAGGGCAAAGATGTTGGTGCAAAAATTGATATGGAGAGAGCCCTGGAGCACCAAAATCTGCTGATCAGTAAGTTCCAAGCCATGGAAAATGCTCAGAAGGAATGGGAACAGAAATTTAAGGTGGCTGAGATGTCAACGCTGTGCAACCCCCAACGTGAAGAAGAAGAAGAAGAAGAAGCAGAAACCCTAAAATTCAAAGATATTTCATCTTCTGAAAATAAAAAAGCCGACTTCAGATGCACGAATTCTGAGAGATCCATCACTGCTTCTTCCAGCAATGCAAATTCCCATTCACATGATCACAAGCTGCAGAAGCTTCCAGAAGCTAGAGGAAGCTCCCGGAGGCAGATATTCCGACCCCAAGCGGCCAACAGCGGCGGCGGAGGCTTGGAAAATGTGCTGCGGTCTCTTCAGCGAGCGAGGATATCAATCCATAGGGAGCTGGCCAAGGCAGTCGACATTCCGAACGGGTCTTCGGCATTGTTCAGGCTGCCCTCTGATTCCCGAATGGCTGTCTCCGGCCCCAATGTGTACGGCTCCGCCCTGAGATTAACCGCTTCTCGCCCCGATCTGCCTCTCATCGCCCCCGACGACCGATTTCTGCGGAGTCGATATGCGGAATACGGCTTTCCCTATTCTTCGGCCTCGTCTTCCTCAGGCGGATTTCTTCCCGGCGGCAGCGGACACGGCCATGGCCGCAGGTACTCGGACTCACGTTCTCCTTATTATTGATTGATGGGATTTTTACATATCTACCACAAACTTATTCTTCTTTTACAAATTTTTTAAATATTTCGTATATATATATATCGCAAAATAATAAAAGAAAAGCATCGCATCACAATTTTTTGTATATAAAGTTCATATAAATGAAAATTTGCATCTGCGTAGAAAGAAAATTAAGATAAGATAAAGTATGATATTTATGTTAAAATGTGGTTTTCCTAAAAAAATTTAAAAAATCTATGGTACGTATGATATATTTAAAAAAGTTTTGTTAAATTTATAAATAAAAAAAAAATTGTGGTATATATGTAAAAATCCATTATTGATTAATGGATTGATCGGTTCCCTTTCTATTCTTCTTGACACAAAGTTTGCGGGAAAAGTTGTAGAATTGGTTCCATGGATCTGTAATCTTGTTGCTGTCAAGTAGTGGTTTTTTGTTGGACATTTTGATGTGTAGTGAGTGATGCATTATGCAATACAAGATGTGGTTGTGTTTTTATGGCAAACAATATCTTAAGCCAGAGGATCTAATCTCATCATTCGTACATATGCTAAGTTTAAATGAATAATGTGAATGGTGTTATGGTTTAGTAGTTAAAGCTCTGTGTTTGCTCTTCCAGTCGCATATTTATTTCTTATATGA

Network for GWHGAAEX010375

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	74.290
SRP064423	SRR2545915	Juvenile tuber	47.590
SRP108465	SRR5643513	five period of Gastrodia elata	34.670
	SRR5643514	five period of Gastrodia elata	31.690
	SRR5643515	five period of Gastrodia elata	34.380
	SRR5643524	five period of Gastrodia elata	31.510
	SRR5643525	five period of Gastrodia elata	44.260
	SRR5643528	five period of Gastrodia elata	50.360
	SRR5643658	five period of Gastrodia elata	54.330
	SRR5643659	five period of Gastrodia elata	35.130
	SRR5643660	five period of Gastrodia elata	49.890
	SRR5643661	five period of Gastrodia elata	44.160
	SRR5643662	five period of Gastrodia elata	33.980
	SRR5643663	five period of Gastrodia elata	35.920
	SRR5643664	five period of Gastrodia elata	38.300
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	67.670
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	61.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	51.060
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	75.480
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	77.370
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	92.390
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	66.900
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	67.470
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	34.330
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	47.070
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	35.590
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	35.590
SRP279888	Gastro	Gastrodia elata tuber	50.39
	Juven	Juvenile tuber	30.11
	Mother_Gastro	Mother tuber of Gastrodia elata	36.14
	Mother_Juven	Mother tuber of Juvenile	33.95