Detail information of GWHGAAEX010395/evm.TU.scaffold_291.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|565348405|ref|XP_006341203.1|7.50E-20PREDICTED: transcriptional regulator TAC1-like [Solanum tuberosum]
Swissprottr|Q9SR34|TAC1_ARATH1.00E-16Transcriptional regulator TAC1
trEMBLtr|A0A072U0P2|A0A072U0P2_MEDTR2.00E-19C2H2 and C2HC zinc finger protein {ECO:0000313|EMBL:KEH22971.1}
TAIRAT3G092904.00E-16telomerase activator1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000290273702274040-
Transcript Sequence

Network for GWHGAAEX010395

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.220
SRR2545915Juvenile tuber1.480
SRP108465SRR5643513five period of Gastrodia elata167.810
SRR5643514five period of Gastrodia elata378.280
SRR5643515five period of Gastrodia elata127.760
SRR5643524five period of Gastrodia elata201.770
SRR5643525five period of Gastrodia elata0.830
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata1.600
SRR5643661five period of Gastrodia elata0.530
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_166.500
SRR6049655Rhizomagastrodiae_C368-T10_good_1165.180
SRR6049656Rhizomagastrodiae_C368-T07_good_173.000
SRR6049657Rhizomagastrodiae_C368-T07_good_133.290
SRR6049658Rhizomagastrodiae_C368-T04_good_174.210
SRR6049659Rhizomagastrodiae_C368-T04_good_171.190
SRR6049660Rhizomagastrodiae_C368-T01_good_126.570
SRR6049661Rhizomagastrodiae_C368-T04_good_134.840
SRR6049662Rhizomagastrodiae_C368-T01_good_1134.980
SRR6049663Rhizomagastrodiae_C368-T01_good_1122.540
SRR6049664Rhizomagastrodiae_C368-T10_good_1221.050
SRR6049665Rhizomagastrodiae_C368-T10_good_1221.050
SRP279888GastroGastrodia elata tuber 0.30
JuvenJuvenile tuber3.87
Mother_GastroMother tuber of Gastrodia elata 288.59
Mother_JuvenMother tuber of Juvenile 135.58