Detail information of GWHGAAEX010397/evm.TU.scaffold_292.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|295695138|ref|YP_003588376.1|3.00E-41major facilitator superfamily protein [Kyrpidia tusciae DSM 2912]
KOGKOG25326.00E-160Permease of the major facilitator superfamily
nrgi|672124115|ref|XP_008785434.1|0PREDICTED: probable anion transporter 2, chloroplastic [Phoenix dactylifera]
Swissprottr|Q7XJR2|ANTR3_ARATH0Probable anion transporter 3, chloroplastic (Precursor)
trEMBLtr|W9RGS2|W9RGS2_9ROSA0Putative anion transporter 3 {ECO:0000313|EMBL:EXB89955.1}
TAIRAT2G380606.00E-160phosphate transporter 4;2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000288127234134441+
Transcript Sequence

Network for GWHGAAEX010397

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07690.15MFS_1904374.60E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0005887Cellular Componentintegral component of plasma membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.980
SRR2545915Juvenile tuber7.400
SRP108465SRR5643513five period of Gastrodia elata14.170
SRR5643514five period of Gastrodia elata14.020
SRR5643515five period of Gastrodia elata13.960
SRR5643524five period of Gastrodia elata16.590
SRR5643525five period of Gastrodia elata15.900
SRR5643528five period of Gastrodia elata16.100
SRR5643658five period of Gastrodia elata13.600
SRR5643659five period of Gastrodia elata13.320
SRR5643660five period of Gastrodia elata15.430
SRR5643661five period of Gastrodia elata16.020
SRR5643662five period of Gastrodia elata16.090
SRR5643663five period of Gastrodia elata14.230
SRR5643664five period of Gastrodia elata17.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.270
SRR6049655Rhizomagastrodiae_C368-T10_good_113.230
SRR6049656Rhizomagastrodiae_C368-T07_good_118.690
SRR6049657Rhizomagastrodiae_C368-T07_good_116.220
SRR6049658Rhizomagastrodiae_C368-T04_good_115.190
SRR6049659Rhizomagastrodiae_C368-T04_good_116.440
SRR6049660Rhizomagastrodiae_C368-T01_good_116.000
SRR6049661Rhizomagastrodiae_C368-T04_good_115.860
SRR6049662Rhizomagastrodiae_C368-T01_good_117.150
SRR6049663Rhizomagastrodiae_C368-T01_good_115.790
SRR6049664Rhizomagastrodiae_C368-T10_good_116.290
SRR6049665Rhizomagastrodiae_C368-T10_good_116.290
SRP279888GastroGastrodia elata tuber 19.51
JuvenJuvenile tuber23.05
Mother_GastroMother tuber of Gastrodia elata 29.08
Mother_JuvenMother tuber of Juvenile 30.45