Gene detail

Detail information of GWHGAAEX010398/evm.TU.scaffold_292.5

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|291302532\|ref\|YP_003513810.1\|	2.00E-37	cytochrome P450 [Stackebrandtia nassauensis DSM 44728]
KOG	KOG0156	5.00E-117	Cytochrome P450 CYP2 subfamily
nr	gi\|502100199\|ref\|XP_004491658.1\|	0	PREDICTED: uncharacterized protein LOC101503808 [Cicer arietinum]
Swissprot	tr\|A6YIH8\|C7D55_HYOMU	1.00E-157	Premnaspirodiene oxygenase
trEMBL	tr\|A0A087GUL2\|A0A087GUL2_ARAAL	0	Uncharacterized protein {ECO:0000313\|EMBL:KFK33564.1}
TAIR	AT3G26300	5.00E-117	cytochrome P450, family 71, subfamily B, polypeptide 34

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000288	180240	200514	+

Transcript Sequence
>GWHTAAEX010398 ATGTTATCTATCATCACACCAATCATATTTTGCATTCTACTTGCTCTCTTATTTAAAAAGGTTAGTGCACCAAAAGTCATCCATGCTATAAAGCTCCCTCCAAGCCCATGGAAACTCCCCTTTATAGGTAGCTTGCATCATCTTCCCAGAGAGAAACCACACCGAAAACTACTTAGCCTTGCAAATAAATATGGGCCTATTCTTCACCTCAAACTTGGACAGATAGATCATATTGTAATTACTTCCTCAGAACTTGCCCAAGAAGTCCTGATGACCCATGACATCAACTTTGCTTCACGTCCTCAATTTCTTGTCTCCAAAGTAGTTTTCTACAAAGGCAGTGACATTTCATTTTCTCCATATGGCAAGTATTGGCTACAACTACGCAAAATATGCACATCCGAACTATTAAACACCAAACGAGTTGAGTCTTTTAGTGTCATGAGAGATGAAGAAGGACATAATCTCGTAGAGAAGATTCGTGCGGCTAATGGTTTGCCAGTAAATCTAACTAAGTTGCTTTTAACTATAGCGAACACTCTTACTTCAAGGGCAGTGCTTGGGAAGGACTGGGCACAACAGGAAAAATTTATTTATGCCATGAAGAAAGTACTTCAATGTTTGTCTTTGTCAAATATCGTTGATATTTACCCATCCATGAGTTTTCTTGGTGAATTAACTGGTTATAGGGCTCGGTTGGAGAGTGTGCATCAACAAATGGATAAAATATTGGATGAGATAATTGAGGATCATCAGGCTACGAAGCATGACAGAGATGATATTAATGAGGATATTGTTGATGTTTTCCTCAGAATCAAGAAAGAAGGGCGGTTGGATCTTCCACTCTCAAGAGATAATATCAAAGCTGCGCTATTGAATTTATTAGTAGGAGGTACTGAAACTACCGCTTCAACTATTGTTTGGGCCATGTCTGAACTCATTCGACATCCTAGTATTATGCAGAAGGCACAGTCAGAAGTTCGCAGGTCTTTTGATGGAAAAGAACGGATTGAGATTGGAGATGTCAGGAAGCTTCCATATTTTAGCCATATCATTAAAGAAACCCTAAGATTGCACCCAGCGGGCACCTTACTGGCTAGGCTTTGCCAGGATACAATCAAAATAGGAGGTTACACAATACCGTCCGGAAGTCGAATTATTATCAATATATGGGCTATCATGAGAGACCCAAAATATTGGGAGGATTCAGAAAAGTTTCTACCGGAAAGATTTGCAGACGATGCATTAGATTATAAAGGAACCAAACCTGAGTACATTCCCTTTGGCGCAGGGAGGAGAATTTGTCCTGGTCAATTATTTTCTACAGCTGCCATTGAATGTTGGCTTGCATTATTGCTCTTTCACTTTGATTGGAAGCTTCCTAAGGGCAAGAAGCATGAGGAATTAGATATGGATGAAGTTATTGGTTCGGGGATACACGAAGAGCAATGCTCTCCAAAAACGAGCTTAAGCCAAAACATGAATATAATTATACTATCATACGTCCTGCTGCTCTACATACTCGTTGTTCTATTTCTAAGAAAGTTTAAGAACCGAAAAGCCTTTCTAGATATTAAGCTCCCACCAGGTCCATGGAAACTCCCATTTATAGGAAGCCTGCATCATCTTGTTGGAGAGCAAACTCACCGAAGACTGCGTAGACTAGCGAGTAAATACGGGCCTCTGGTTCACCTCAAACTCGGAGAGATAAATTTCATCGCCATTACATCCCCAGAACTCGCCTTTCAGATTATGAAGACCCACGACACCAACTTCGCTTCACGTCCAAAGTATATAGGCACCAACATAATTTTCTACGATAGCCTCGACATTGTCTTTTCTCCGCACGGCAAGTACTGGTCTCAACTGCGCAAAGTATGCATGGTCGAGCTGCTAGGCGCCAAGGGCGTCGAATCTTTAGATCTCATAAGAGAGGAGGAAGGAGAGAAACTCGTGCAGTGCATCCACATGGCGAATGGCTCGCCTTTGAATCTCATTGAGATTTTCTTTTCTTTAGGAAACACTTACCTTTCAAGAGCAGCATTTGGGAAGAAGTGTGCCCAACAGAAGAGGTTTATAGATACTATGAAGAAAGCGGTCGACTGTTTATTGGGGTTCAGTATTGTTGAACTATACCCCTCGTTGAGTTATCTCCGCAGGTTGACCAGTTTTAAAGCTCAGTTGGAGAAAGTGCATCAGCAGTTGGATGAGATATTAGATGAGATGTTTGAGGAGCATAAGGCTGCAAAGAAAAATGCGGATTGTATTCATGAGGATATTGTTGATGTTCTATTCAAATTCGTAGACAACAAGAAGGTCAATATTCCACTCACAAAAAACAATATCAAAGCTGTGATATTGGATTTATTTTTTGGAGGAACTTTTACTACAGCCATAACTATGGAGTGGGCCATATTTGAACTCATTCGACATCCAAAGATTATGCAAAAGGTTCAATTGGAAGTGAGAACATCTTTTGAAGGAAAAGAAATAATAGGGATAAGAGAAATTAGCAAGCTCCCCTATTTAAGACAAATAATTAAAGAAACACTAAGATTGCACCCTCCAGGCCCACTATTGCTACCGAGGCTCTGTCACGACACAATCAAAATTGGGGGTTACACAATTCCATCCGGAAGCCAAATTATTATCAATGCATGGGCTATTATGAGAGACCCAAAATATTGGATTGATTCAGAGATATTTCAACCTGAGAGATTTGAGGACACTACATTGGATTATGAAGGAACAAAATTTGAGTACATTCCCTTTGGTGCGGGAAGGAGAACTTGTCCTGGCAAAGCATTTGCTATAGCTGGTATAGAATTCTGGCTTGCACAATTGCTCTTTCACTTTGATTGGAAGCTCCATGGTGGCAAAAAGCCAGAAGACTTGGACTTGAAAGTAGTTTTTGGTTTGACAATATCTAGAAAAAGTGAAATATTTTTGCAAGCCACTCCTCACAAATGTTCTTCCCATTTGACAAAATAAAAAGATATCATTTTCCC

Network for GWHGAAEX010398

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	33	472	2.30E-97
PF00067.21	p450	528	972	5.10E-97

Protein Sequence

>GWHPAAEX010398
MLSIITPIIFCILLALLFKKVSAPKVIHAIKLPPSPWKLPFIGSLHHLPREKPHRKLLSLANKYGPILHLKLGQIDHIVITSSELAQEVLMTHDINFASRPQFLVSKVVFYKGSDISFSPYGKYWLQLRKICTSELLNTKRVESFSVMRDEEGHNLVEKIRAANGLPVNLTKLLLTIANTLTSRAVLGKDWAQQEKFIYAMKKVLQCLSLSNIVDIYPSMSFLGELTGYRARLESVHQQMDKILDEIIEDHQATKHDRDDINEDIVDVFLRIKKEGRLDLPLSRDNIKAALLNLLVGGTETTASTIVWAMSELIRHPSIMQKAQSEVRRSFDGKERIEIGDVRKLPYFSHIIKETLRLHPAGTLLARLCQDTIKIGGYTIPSGSRIIINIWAIMRDPKYWEDSEKFLPERFADDALDYKGTKPEYIPFGAGRRICPGQLFSTAAIECWLALLLFHFDWKLPKGKKHEELDMDEVIGSGIHEEQCSPKTSLSQNMNIIILSYVLLLYILVVLFLRKFKNRKAFLDIKLPPGPWKLPFIGSLHHLVGEQTHRRLRRLASKYGPLVHLKLGEINFIAITSPELAFQIMKTHDTNFASRPKYIGTNIIFYDSLDIVFSPHGKYWSQLRKVCMVELLGAKGVESLDLIREEEGEKLVQCIHMANGSPLNLIEIFFSLGNTYLSRAAFGKKCAQQKRFIDTMKKAVDCLLGFSIVELYPSLSYLRRLTSFKAQLEKVHQQLDEILDEMFEEHKAAKKNADCIHEDIVDVLFKFVDNKKVNIPLTKNNIKAVILDLFFGGTFTTAITMEWAIFELIRHPKIMQKVQLEVRTSFEGKEIIGIREISKLPYLRQIIKETLRLHPPGPLLLPRLCHDTIKIGGYTIPSGSQIIINAWAIMRDPKYWIDSEIFQPERFEDTTLDYEGTKFEYIPFGAGRRTCPGKAFAIAGIEFWLAQLLFHFDWKLHGGKKPEDLDLKVVFGLTISRKSEIFLQATPHKCSSHLTK

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B34

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0005506	Molecular Function	iron ion binding
GO:0020037	Molecular Function	heme binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	264.370
SRP064423	SRR2545915	Juvenile tuber	20.850
SRP108465	SRR5643513	five period of Gastrodia elata	308.070
	SRR5643514	five period of Gastrodia elata	249.920
	SRR5643515	five period of Gastrodia elata	103.120
	SRR5643524	five period of Gastrodia elata	197.500
	SRR5643525	five period of Gastrodia elata	0.240
	SRR5643528	five period of Gastrodia elata	0.510
	SRR5643658	five period of Gastrodia elata	0.400
	SRR5643659	five period of Gastrodia elata	21.330
	SRR5643660	five period of Gastrodia elata	18.000
	SRR5643661	five period of Gastrodia elata	16.980
	SRR5643662	five period of Gastrodia elata	6.710
	SRR5643663	five period of Gastrodia elata	7.800
	SRR5643664	five period of Gastrodia elata	4.260
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	145.490
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	269.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	194.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	162.410
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	99.080
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	107.150
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	155.690
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	130.770
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	149.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	98.040
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	257.490
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	257.490
SRP279888	Gastro	Gastrodia elata tuber	20.18
	Juven	Juvenile tuber	462.34
	Mother_Gastro	Mother tuber of Gastrodia elata	85.82
	Mother_Juven	Mother tuber of Juvenile	114.66