Detail information of GWHGAAEX010408/evm.TU.scaffold_294.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392382816|ref|YP_005032013.1|7.00E-55putative zinc protease (mpp-like) [Azospirillum brasilense Sp245]
KOGKOG20675.00E-169Mitochondrial processing peptidase, alpha subunit
nrgi|743817982|ref|XP_010931091.1|0PREDICTED: mitochondrial-processing peptidase subunit alpha-like [Elaeis guineensis]
Swissprottr|P29677|MPPA_SOLTU0Mitochondrial-processing peptidase subunit alpha (Precursor)
trEMBLtr|M0TUZ7|M0TUZ7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P30450_001}
TAIRAT1G519805.00E-169Insulinase (Peptidase family M16) protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000028654813108244+
Transcript Sequence

Network for GWHGAAEX010408

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00675.19Peptidase_M16932361.30E-35
PF05193.20Peptidase_M16_C2494291.40E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0046872Molecular Functionmetal ion binding
GO:0004222Molecular Functionmetalloendopeptidase activity
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.980
SRR2545915Juvenile tuber22.040
SRP108465SRR5643513five period of Gastrodia elata17.550
SRR5643514five period of Gastrodia elata17.970
SRR5643515five period of Gastrodia elata14.230
SRR5643524five period of Gastrodia elata16.140
SRR5643525five period of Gastrodia elata9.920
SRR5643528five period of Gastrodia elata6.820
SRR5643658five period of Gastrodia elata6.960
SRR5643659five period of Gastrodia elata21.420
SRR5643660five period of Gastrodia elata21.090
SRR5643661five period of Gastrodia elata21.570
SRR5643662five period of Gastrodia elata13.850
SRR5643663five period of Gastrodia elata14.110
SRR5643664five period of Gastrodia elata14.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.680
SRR6049655Rhizomagastrodiae_C368-T10_good_117.280
SRR6049656Rhizomagastrodiae_C368-T07_good_119.280
SRR6049657Rhizomagastrodiae_C368-T07_good_121.010
SRR6049658Rhizomagastrodiae_C368-T04_good_118.180
SRR6049659Rhizomagastrodiae_C368-T04_good_117.760
SRR6049660Rhizomagastrodiae_C368-T01_good_118.430
SRR6049661Rhizomagastrodiae_C368-T04_good_117.220
SRR6049662Rhizomagastrodiae_C368-T01_good_122.690
SRR6049663Rhizomagastrodiae_C368-T01_good_119.840
SRR6049664Rhizomagastrodiae_C368-T10_good_120.370
SRR6049665Rhizomagastrodiae_C368-T10_good_120.370
SRP279888GastroGastrodia elata tuber 21.85
JuvenJuvenile tuber22.06
Mother_GastroMother tuber of Gastrodia elata 9.68
Mother_JuvenMother tuber of Juvenile 11.82