Gene detail

Detail information of GWHGAAEX010418/evm.TU.scaffold_295.9

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1471	4.00E-122	Phosphatidylinositol transfer protein SEC14 and related proteins
nr	gi\|695055537\|ref\|XP_009415954.1\|	4.36E-143	PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|F4J7S8\|SFH9_ARATH	3.00E-123	Phosphatidylinositol/phosphatidylcholine transfer protein SFH9
trEMBL	tr\|M0TWN0\|M0TWN0_MUSAM	8.00E-142	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P01730_001}
TAIR	AT3G24840	4.00E-122	Sec14p-like phosphatidylinositol transfer family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000287	230131	237786	-

Transcript Sequence
>GWHTAAEX010418 ATGCCTGCGACTTCGTCGGAGAAGAGGCAGCGCTCGGTAAGGGGGCAAAGGCCGGAGCTTTTCCAGCTGCCGGATGCCGAGGTGAGGGCGAATGGAAGGCTGGAGGACCCAGAGGAGGAGAGAGCGGTGAAAGAGTTTAGCCGGGCTCTGATGGATAGAGGTCTGCTGCCGCCGCGGCATGATGATTACTACACCATGAGGAGGTTTTTGAAAGCTAGATGCTTTAATGTAGAAAAGGCAATCCATATGTGGTCAGAAATGCTACGGTGGAGAGCAGACTTTGGTGCAGATTTTATCCTCCATGACTTTGTTTTTTCTGAATTAGAAGAGGTTCGCTCTTACTATCCTCATGGTTTTCATGGAGTGGACAAGGACGGTAGACCTGTCTACATTGAAAAACTTGGAAAAGTAGATCCAAATAAACTTTTGAATGTTACTTCCGTCGAAAGGTTTTTGAAATATCATGTTCAAGTTATAGAGAAGATCTTTTGTGAGAGATATCCGGCATGTTCGATTGCTGCTAACAAGCACATTGATACTATGACAACTGTTTTAGATGTTGAAGGTTTGAGCTGGATGAATGTTGGGAAATTAGTTAACTTGGTTCAGGATTTTATCATCCGCATCAATAAAATTGATAGCAATAACTATCCTGAGATTTTGAATAAAATGTTCGTTGTTAATGCTGGCAGTGGTTTCAGATTGTTATGGAATGCGTTGAAAGGTTTCATTGATCCAAGAACTAAAGCAAAAATAGAGGTGAAATTTTTTTTTCGATATTTCAAAACAGTTTTAAGTAGTGTAATGATCTTTTTTTTGCAGGTTTTAGGAAGTGCATACCAGCAAAAACTGCTTGAGTGGATTGACAGGAGCCAACTTCCTAAGTTTCTTGGTGGTTCATGCACTTGTGAAAAAGTTGGAGGATGTCTTCGATCAAATAAAGGACCATGGAATGATCCAGAATTAATGAAATTGATTCAAGCTAAGCAAGTAAATACATGGAATGAAAGCATCCAATTTGATGACATGAGGAATCTGGGGGTCAAAGCTTCCCTCAACAAGTATGATGGGTTTGGCATTCAATCAGAGCTGCCTATCGAAGATGCATTTTCTCCTATTAGATCAAGGGCTTGCTCAACTTCCCAGGTTGCTCCATTTGATGAAGATACTAGGGAGCATAGACTTGGGAGAGCCTGTTGCATTGGAAGAAACAGCTGCTATACGAAGACGAGGATTAGATCTTACTCCATAAAATAATATATATTTATTTTGTTTGTTTGTTTTTTTCTTTTTCTTTATTTTAAAGTTTAATAAATGAATTGTAATGGCTATGAATGGATGTACTTTGTGTGTGTTAATGAATGAATCATAATTTATACTTAATTATTTTAATAGTATTCTACGATCCCCACACCTTGT

Network for GWHGAAEX010418

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03765.14	CRAL_TRIO_N	37	85	6.30E-05
PF00650.19	CRAL_TRIO	110	254	6.00E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.710
SRP064423	SRR2545915	Juvenile tuber	8.810
SRP108465	SRR5643513	five period of Gastrodia elata	6.090
	SRR5643514	five period of Gastrodia elata	4.680
	SRR5643515	five period of Gastrodia elata	6.440
	SRR5643524	five period of Gastrodia elata	4.990
	SRR5643525	five period of Gastrodia elata	8.630
	SRR5643528	five period of Gastrodia elata	11.990
	SRR5643658	five period of Gastrodia elata	11.030
	SRR5643659	five period of Gastrodia elata	8.230
	SRR5643660	five period of Gastrodia elata	5.990
	SRR5643661	five period of Gastrodia elata	6.470
	SRR5643662	five period of Gastrodia elata	4.840
	SRR5643663	five period of Gastrodia elata	6.180
	SRR5643664	five period of Gastrodia elata	6.390
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.680
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.990
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.570
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.430
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.300
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.750
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.660
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.850
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.220
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.220
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.080
SRP279888	Gastro	Gastrodia elata tuber	6.32
	Juven	Juvenile tuber	4.30
	Mother_Gastro	Mother tuber of Gastrodia elata	9.37
	Mother_Juven	Mother tuber of Juvenile	5.81