Gene detail

Detail information of GWHGAAEX010426/evm.TU.scaffold_296.7

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672173268\|ref\|XP_008806760.1\|	0	PREDICTED: B3 domain-containing protein Os07g0563300-like [Phoenix dactylifera]
Swissprot	tr\|Q0D5G4\|Y7633_ORYSJ	0	B3 domain-containing protein Os07g0563300
trEMBL	tr\|M0TMD3\|M0TMD3_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P03800_001}
TAIR	AT2G30470	5.00E-146	high-level expression of sugar-inducible gene 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000291	134901	185149	-

Transcript Sequence
>GWHTAAEX010426 ATGTCGTTGTCCTCAGTGGCGACGGCTGTGGCGACGGGGGGGCTCAAGATCTGCTTTAACGTTCACTGCAAGGTGGCTTTGACGGAGCAAACTCGCCGGAAGGGATGGCGTCTGCGTTCCGGCGAGCTCTCCGAGCTCTGCGACCGCTGCCATTCTACTTTTGATCAAGGAAACTTCTGCGAGACTTACCATTCGGATGCGGCTGGGTGGAGAAAATGCGAGTCGTGTGGCAAGAGGATTCACTGTGGCTGCATTGTTTCGATTCCTGCTTATATGCTTCTGGATGTAGGAGGAGTTGAGTGTATGACTTGTGTTAGGAAGGCTTACTCAACTATACAAAATCAGGTTTGCTCACCTTCTGTGGTTCTTTCTCCACACGTGCCTGAGAAATCAAAAGAATTTCCAATTAAGAGTTGGAACCAAATGTCCGGTTCATTTCCAGGACAGTGGCGTCACCCTTCAAACATTTGGAATTTGTCTAGTATCCAATCTGACTTACACCAACGACTATCATATGAGTTTGACAGGCCATCTAATTCTGATAAATTGATTGCTGGAAATCGCCCTTCTATTGCTGCACAGGAGAATAAGGCAGATGACCTTTCTGAAAGATTTGCTTCAAATGGTTTAAACCATGTTTTTCGGGATAGATGTGGTGAGAATTGTCCAGGTTCAACAAAAAGAGGGATGATGTTAGATGCTTGCTCTGCTAATTCTTCTGGTACTAACTTTGAGATACATCAAAGTTCATCCGGAAAACCATCACACTCTCTCCAACCAAAGGTGGAGTCAACATCCTTGTTAACTGGTCTGACTGCTTCTCTCTCATCTGTAAATGGGATAAGTGATTCAATCAGGGCTACAACAAATCATCCGAAGCTCCAAACAGTTTCTTCCCCATTGCCCAAGAAATTTTATTCCAGTACCTTGAACAGTTCTAACACTAGAGAATTACAAGCTCAGGCTCGCAGTGGAAGAGGACGGCTGGATCTAAGGGCGCGCTCTCATTTGCTTCCTAGATATTGGCCTAGGATCACCGATCAAGAACTGCAAATAATATCGGGAGGTTCGAATGCTGTCGTGATACCCCTTTTTGAAAAGATGCTGAGTGCAAGTGATGCAGGTCGCATTGGGCGTTTAGTGTTGCCAAAAAAATGTGCTGAGGCATACTTTCCTACAATTTCTCAGCCAGAAGGCCTTCCATTAAAAATACAAGATGCCAGTGGTAAGGAGTGGGTATTTCAGTTTCGATATTGGCCTAATAACAACAGTAGGATGTATGTTTTAGAAGGAGTAACACCTTGCATACAGTCGATGCAATTGCAAGCAGGTGACACAGTAACGTTTAGCCGGATTGATCCTGAAGGAAAGTTTCTCATGGGATTCAGGAAGGCTTCTACTGCATCGTGTAATGAGCAGGACAGTCATGAAGCTAAAGCTGGGAATGGTTCTGCATCTTCAGATGTTAAAAGCAATGCGATGGAGTTCATGGTAAATCCCCCTCATCGACACCAAAAAGGAAATCTAGAATCAAGAAATCAAATGGAGGCAACAAACAAGGAATGCTGGTCAAAGAATGAGAAGGATGAATTCATCCAGAAGGATGGCTCTTCTCCAAAGGATTCTCACACTCCATGTAAAAAGAAAAGCAGCACTATTGGTTCAAAAAGTAAGCGCCTGAGAATTGAAAATGAAGACTCAATTGAGTTGAACCTAACTTGGGAAGAGGCCCAAGTTCTGATTCGATTGCCTCTTAATGATTGTTCCAATGTTGTCAGTGTCAGTGTTGAAGGGCATGAATTTGAGGAATTTGAGGTATGGCTCTTAATCTGTTTTGTGCTATGGTTCATATTCTGTTTTCTTCACAGGGATCTTTATAATCGCTGGGTGCAGTGTGAAAATTGTTTCAAGTGGCGTAGGCTTCCATTGGATGTACTTCTGCACCATAGATGGACTTGTTCTGATAATAAATTGGATCCTGAAAGGTCATCGTGCTTGTCTCCTCAGGAAATGTCCGCAGAGATTACCCATTTACTTGCAATGAGAAATGGTTCTTCGTCAAAGAGATCCAAGCAACTGAAAACTGAGGAGGAGAATTGCGAGGCATCGGATGGGCTGGACACGCTGGCAAACCTGGCCATTCTGGGGGAGAGTGAAGCCGTGTTGACGACATCATCCTCCCAGCCAACTACGAAGCATCCACGGCATCGTCCTGGCTGCACCTGCATCGTATGCATCCAACCCCCGAGCGGCAAAGGACCCAAGCACAAGCAAAGCTGCACATGCAATGTCTGTCTCACCGTCAAGCGGCGCTTCCGGACACTGATGCTCCGCCGAGAGAAGCGCCGATCTGAGAAGGATGCTGAGAGCACCGAACCCCTCAACAGGCAGCAGAACAGTTCTGCCCACCAGCTGGCACAGGTGTCGCCCCCCACCACGCCGTCTCCATCCACATCCCCTTCGGCTCCGATTATTCACAGCGCGAGTGGCGGACTTTCGTTCCCAATTGATGATGAATCATTGGAACCGAAGAGCGTTGCGCCATCTATACTAATGAAAAAAACACAGATTGATCTGAACAGCCAACCGGAGCGGGATGAAGAGCCGTCGCCTGTTGCTGTTTCTGGAAGCATGATTAGGGCAGCTGCTTTCCGAGATGAACTTGATTAG

Network for GWHGAAEX010426

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02362.20	B3	365	464	3.30E-16
PF07496.14	zf-CW	629	670	3.20E-11

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	B3

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding
GO:0008270	Molecular Function	zinc ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	28.170
SRP064423	SRR2545915	Juvenile tuber	20.250
SRP108465	SRR5643513	five period of Gastrodia elata	23.280
	SRR5643514	five period of Gastrodia elata	22.350
	SRR5643515	five period of Gastrodia elata	25.740
	SRR5643524	five period of Gastrodia elata	22.650
	SRR5643525	five period of Gastrodia elata	22.210
	SRR5643528	five period of Gastrodia elata	34.340
	SRR5643658	five period of Gastrodia elata	25.910
	SRR5643659	five period of Gastrodia elata	17.840
	SRR5643660	five period of Gastrodia elata	20.230
	SRR5643661	five period of Gastrodia elata	18.810
	SRR5643662	five period of Gastrodia elata	20.190
	SRR5643663	five period of Gastrodia elata	17.030
	SRR5643664	five period of Gastrodia elata	19.940
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	23.850
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	46.290
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	23.230
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	29.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	32.640
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	38.610
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	31.700
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	27.590
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.510
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.720
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	36.290
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	36.290
SRP279888	Gastro	Gastrodia elata tuber	23.51
	Juven	Juvenile tuber	37.41
	Mother_Gastro	Mother tuber of Gastrodia elata	46.67
	Mother_Juven	Mother tuber of Juvenile	61.75