Detail information of GWHGAAEX010450/CADD00832.2.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47632.00E-37Ubiquinol-cytochrome c reductase hinge protein
nrgi|672121681|ref|XP_008784141.1|3.00E-37PREDICTED: cytochrome b-c1 complex subunit 6-like [Phoenix dactylifera]
Swissprottr|P48504|QCR6_SOLTU2.00E-30Cytochrome b-c1 complex subunit 6
trEMBLtr|Q0WWE3|Q0WWE3_ARATH4.00E-36Cytochrome b-c1 complex subunit 6 {ECO:0000256|PIRNR:PIRNR000019}
TAIRAT1G151202.00E-37Ubiquinol-cytochrome C reductase hinge protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000230527983064787-
Transcript Sequence

Network for GWHGAAEX010450

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02320.15UCR_hinge471082.20E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00416QCR6, UQCRH Metabolic pathways map01100
Oxidative phosphorylationmap00190
Cardiac muscle contractionmap04260
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms71.160
SRR2545915Juvenile tuber81.290
SRP108465SRR5643513five period of Gastrodia elata121.050
SRR5643514five period of Gastrodia elata183.970
SRR5643515five period of Gastrodia elata136.640
SRR5643524five period of Gastrodia elata181.230
SRR5643525five period of Gastrodia elata123.020
SRR5643528five period of Gastrodia elata130.340
SRR5643658five period of Gastrodia elata91.310
SRR5643659five period of Gastrodia elata92.150
SRR5643660five period of Gastrodia elata93.600
SRR5643661five period of Gastrodia elata94.990
SRR5643662five period of Gastrodia elata77.260
SRR5643663five period of Gastrodia elata85.690
SRR5643664five period of Gastrodia elata79.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_178.850
SRR6049655Rhizomagastrodiae_C368-T10_good_1204.260
SRR6049656Rhizomagastrodiae_C368-T07_good_199.060
SRR6049657Rhizomagastrodiae_C368-T07_good_163.570
SRR6049658Rhizomagastrodiae_C368-T04_good_173.430
SRR6049659Rhizomagastrodiae_C368-T04_good_159.970
SRR6049660Rhizomagastrodiae_C368-T01_good_164.380
SRR6049661Rhizomagastrodiae_C368-T04_good_172.600
SRR6049662Rhizomagastrodiae_C368-T01_good_1128.450
SRR6049663Rhizomagastrodiae_C368-T01_good_196.910
SRR6049664Rhizomagastrodiae_C368-T10_good_1167.790
SRR6049665Rhizomagastrodiae_C368-T10_good_1167.790
SRP279888GastroGastrodia elata tuber 98.27
JuvenJuvenile tuber77.60
Mother_GastroMother tuber of Gastrodia elata 91.40
Mother_JuvenMother tuber of Juvenile 77.97