Detail information of GWHGAAEX010451/evm.TU.scaffold_3.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28710Uncharacterized conserved protein
nrgi|743764413|ref|XP_010912411.1|0PREDICTED: protein FAM188A-like [Elaeis guineensis]
trEMBLtr|M0T6K4|M0T6K4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P13060_001}
TAIRAT1G436900ubiquitin interaction motif-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000230673263095920-
Transcript Sequence

Network for GWHGAAEX010451

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13898.5DUF42051284469.00E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.460
SRR2545915Juvenile tuber39.390
SRP108465SRR5643513five period of Gastrodia elata39.620
SRR5643514five period of Gastrodia elata37.950
SRR5643515five period of Gastrodia elata33.790
SRR5643524five period of Gastrodia elata36.140
SRR5643525five period of Gastrodia elata48.130
SRR5643528five period of Gastrodia elata45.340
SRR5643658five period of Gastrodia elata50.680
SRR5643659five period of Gastrodia elata46.070
SRR5643660five period of Gastrodia elata48.430
SRR5643661five period of Gastrodia elata44.900
SRR5643662five period of Gastrodia elata41.580
SRR5643663five period of Gastrodia elata40.550
SRR5643664five period of Gastrodia elata46.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.510
SRR6049655Rhizomagastrodiae_C368-T10_good_124.620
SRR6049656Rhizomagastrodiae_C368-T07_good_143.320
SRR6049657Rhizomagastrodiae_C368-T07_good_148.420
SRR6049658Rhizomagastrodiae_C368-T04_good_148.880
SRR6049659Rhizomagastrodiae_C368-T04_good_156.940
SRR6049660Rhizomagastrodiae_C368-T01_good_147.760
SRR6049661Rhizomagastrodiae_C368-T04_good_144.840
SRR6049662Rhizomagastrodiae_C368-T01_good_142.580
SRR6049663Rhizomagastrodiae_C368-T01_good_146.080
SRR6049664Rhizomagastrodiae_C368-T10_good_142.930
SRR6049665Rhizomagastrodiae_C368-T10_good_142.930
SRP279888GastroGastrodia elata tuber 42.99
JuvenJuvenile tuber36.94
Mother_GastroMother tuber of Gastrodia elata 44.74
Mother_JuvenMother tuber of Juvenile 40.08