Detail information of GWHGAAEX010452/evm.TU.scaffold_3.47
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 6.00E-29 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 5.00E-178 | Serine/threonine protein kinase |
| nr | gi|743817340|ref|XP_010930903.1| | 0 | PREDICTED: probable receptor-like protein kinase At1g49730 [Elaeis guineensis] |
| Swissprot | tr|Q9FX99|Y1497_ARATH | 1.00E-176 | Probable receptor-like protein kinase At1g49730 (Precursor) |
| trEMBL | tr|M5VWC5|M5VWC5_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ01243.1} |
| TAIR | AT3G19300 | 5.00E-178 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000002 | 3233782 | 3247182 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010452
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 325 | 565 | 7.30E-37 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_URK-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 26.720 |
| SRR2545915 | Juvenile tuber | 27.790 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.800 |
| SRR5643514 | five period of Gastrodia elata | 14.010 | |
| SRR5643515 | five period of Gastrodia elata | 15.220 | |
| SRR5643524 | five period of Gastrodia elata | 13.890 | |
| SRR5643525 | five period of Gastrodia elata | 17.740 | |
| SRR5643528 | five period of Gastrodia elata | 14.920 | |
| SRR5643658 | five period of Gastrodia elata | 14.400 | |
| SRR5643659 | five period of Gastrodia elata | 26.850 | |
| SRR5643660 | five period of Gastrodia elata | 31.910 | |
| SRR5643661 | five period of Gastrodia elata | 25.940 | |
| SRR5643662 | five period of Gastrodia elata | 24.490 | |
| SRR5643663 | five period of Gastrodia elata | 33.880 | |
| SRR5643664 | five period of Gastrodia elata | 31.450 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 23.650 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.560 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.300 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.790 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 25.460 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.110 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 24.490 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.280 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 20.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 14.190 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 14.190 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.92 |
| Juven | Juvenile tuber | 30.71 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 14.18 | |
| Mother_Juven | Mother tuber of Juvenile | 19.66 |