Detail information of GWHGAAEX010453/evm.TU.scaffold_3.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374316994|ref|YP_005063422.1|2.00E-16hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
KOGKOG32747.00E-116Uncharacterized conserved protein, AMMECR1
nrgi|661896730|emb|CDO99919.1|1.65E-128unnamed protein product [Coffea canephora]
Swissprottr|Q9ZVJ2|AMERL_ARATH2.00E-116Uncharacterized protein At2g38710
trEMBLtr|A0A068TVA9|A0A068TVA9_COFCA6.00E-129Coffea canephora
TAIRAT2G387107.00E-116AMMECR1 family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000233962043444281+
Transcript Sequence

Network for GWHGAAEX010453

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01871.16AMMECR1111811.30E-47
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.760
SRR2545915Juvenile tuber16.880
SRP108465SRR5643513five period of Gastrodia elata39.300
SRR5643514five period of Gastrodia elata47.450
SRR5643515five period of Gastrodia elata36.010
SRR5643524five period of Gastrodia elata45.850
SRR5643525five period of Gastrodia elata66.750
SRR5643528five period of Gastrodia elata74.220
SRR5643658five period of Gastrodia elata61.240
SRR5643659five period of Gastrodia elata21.490
SRR5643660five period of Gastrodia elata20.220
SRR5643661five period of Gastrodia elata23.700
SRR5643662five period of Gastrodia elata20.900
SRR5643663five period of Gastrodia elata22.160
SRR5643664five period of Gastrodia elata16.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.160
SRR6049655Rhizomagastrodiae_C368-T10_good_139.630
SRR6049656Rhizomagastrodiae_C368-T07_good_135.160
SRR6049657Rhizomagastrodiae_C368-T07_good_122.890
SRR6049658Rhizomagastrodiae_C368-T04_good_123.890
SRR6049659Rhizomagastrodiae_C368-T04_good_122.970
SRR6049660Rhizomagastrodiae_C368-T01_good_129.000
SRR6049661Rhizomagastrodiae_C368-T04_good_125.620
SRR6049662Rhizomagastrodiae_C368-T01_good_150.600
SRR6049663Rhizomagastrodiae_C368-T01_good_138.780
SRR6049664Rhizomagastrodiae_C368-T10_good_153.060
SRR6049665Rhizomagastrodiae_C368-T10_good_153.060
SRP279888GastroGastrodia elata tuber 15.03
JuvenJuvenile tuber26.10
Mother_GastroMother tuber of Gastrodia elata 29.49
Mother_JuvenMother tuber of Juvenile 22.87