Detail information of GWHGAAEX010456/evm.TU.scaffold_3.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743792622|ref|XP_010923730.1|1.04E-139PREDICTED: probable transcription factor PosF21 [Elaeis guineensis]
Swissprottr|Q9MA75|VIP1_ARATH5.00E-40Transcription factor VIP1
trEMBLtr|F6I181|F6I181_VITVI1.00E-135Putative uncharacterized protein {ECO:0000313|EMBL:CCB60697.1}
TAIRAT4G389004.00E-98Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000238389683857383-
Transcript Sequence

Network for GWHGAAEX010456

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_14995573.40E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.810
SRR2545915Juvenile tuber10.770
SRP108465SRR5643513five period of Gastrodia elata14.150
SRR5643514five period of Gastrodia elata7.580
SRR5643515five period of Gastrodia elata28.470
SRR5643524five period of Gastrodia elata10.800
SRR5643525five period of Gastrodia elata25.750
SRR5643528five period of Gastrodia elata26.810
SRR5643658five period of Gastrodia elata14.480
SRR5643659five period of Gastrodia elata23.050
SRR5643660five period of Gastrodia elata9.480
SRR5643661five period of Gastrodia elata21.350
SRR5643662five period of Gastrodia elata20.310
SRR5643663five period of Gastrodia elata13.340
SRR5643664five period of Gastrodia elata23.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.320
SRR6049655Rhizomagastrodiae_C368-T10_good_121.930
SRR6049656Rhizomagastrodiae_C368-T07_good_123.140
SRR6049657Rhizomagastrodiae_C368-T07_good_119.110
SRR6049658Rhizomagastrodiae_C368-T04_good_112.590
SRR6049659Rhizomagastrodiae_C368-T04_good_110.560
SRR6049660Rhizomagastrodiae_C368-T01_good_133.070
SRR6049661Rhizomagastrodiae_C368-T04_good_117.380
SRR6049662Rhizomagastrodiae_C368-T01_good_120.960
SRR6049663Rhizomagastrodiae_C368-T01_good_134.480
SRR6049664Rhizomagastrodiae_C368-T10_good_120.930
SRR6049665Rhizomagastrodiae_C368-T10_good_120.930
SRP279888GastroGastrodia elata tuber 7.04
JuvenJuvenile tuber4.07
Mother_GastroMother tuber of Gastrodia elata 40.17
Mother_JuvenMother tuber of Juvenile 11.66