Detail information of GWHGAAEX010465/evm.TU.scaffold_3.75
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|193216095|ref|YP_001997294.1| | 7.00E-24 | zinc/iron permease [Chloroherpeton thalassium ATCC 35110] |
| KOG | KOG2693 | 4.00E-76 | Putative zinc transporter |
| nr | gi|743823379|ref|XP_010932514.1| | 1.15E-156 | PREDICTED: IAA-alanine resistance protein 1 [Elaeis guineensis] |
| Swissprot | tr|Q9M647|IAR1_ARATH | 4.00E-138 | IAA-alanine resistance protein 1 (Precursor) |
| trEMBL | tr|M5XXI7|M5XXI7_PRUPE | 7.00E-149 | Uncharacterized protein {ECO:0000313|EMBL:EMJ23940.1} |
| TAIR | AT1G68100 | 4.00E-76 | ZIP metal ion transporter family |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000002 | 5168393 | 5217198 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010465
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02535.21 | Zip | 124 | 493 | 3.00E-57 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0030001 | Biological Process | metal ion transport |
| GO:0046873 | Molecular Function | metal ion transmembrane transporter activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 48.790 |
| SRR2545915 | Juvenile tuber | 47.490 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 43.060 |
| SRR5643514 | five period of Gastrodia elata | 46.900 | |
| SRR5643515 | five period of Gastrodia elata | 39.680 | |
| SRR5643524 | five period of Gastrodia elata | 49.530 | |
| SRR5643525 | five period of Gastrodia elata | 33.690 | |
| SRR5643528 | five period of Gastrodia elata | 42.680 | |
| SRR5643658 | five period of Gastrodia elata | 37.620 | |
| SRR5643659 | five period of Gastrodia elata | 25.760 | |
| SRR5643660 | five period of Gastrodia elata | 25.840 | |
| SRR5643661 | five period of Gastrodia elata | 25.920 | |
| SRR5643662 | five period of Gastrodia elata | 23.720 | |
| SRR5643663 | five period of Gastrodia elata | 28.260 | |
| SRR5643664 | five period of Gastrodia elata | 22.990 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 37.160 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 34.460 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 41.930 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 37.070 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 32.850 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 36.900 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 33.360 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 35.430 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 40.680 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 33.230 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 51.330 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 51.330 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 28.72 |
| Juven | Juvenile tuber | 30.01 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 43.00 | |
| Mother_Juven | Mother tuber of Juvenile | 36.44 |