Detail information of GWHGAAEX010467/evm.TU.scaffold_3.83


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00482.00E-64Transcription factor, Myb superfamily
nrgi|255578908|ref|XP_002530307.1|2.22E-72r2r3-myb transcription factor, putative [Ricinus communis]
Swissprottr|Q9FDW1|MYB44_ARATH6.00E-35Transcription factor MYB44
trEMBLtr|B9SWD8|B9SWD8_RICCO8.00E-73R2r3-myb transcription factor, putative {ECO:0000313|EMBL:EEF32074.1}
TAIRAT1G179502.00E-64myb domain protein 52

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000262002066200800-
Transcript Sequence

Network for GWHGAAEX010467

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding4501.40E-16
PF00249.30Myb_DNA-binding56983.40E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.230
SRR2545915Juvenile tuber3.660
SRP108465SRR5643513five period of Gastrodia elata0.930
SRR5643514five period of Gastrodia elata0.350
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.190
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.210
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.710
SRR6049655Rhizomagastrodiae_C368-T10_good_12.450
SRR6049656Rhizomagastrodiae_C368-T07_good_12.190
SRR6049657Rhizomagastrodiae_C368-T07_good_11.250
SRR6049658Rhizomagastrodiae_C368-T04_good_11.770
SRR6049659Rhizomagastrodiae_C368-T04_good_11.300
SRR6049660Rhizomagastrodiae_C368-T01_good_10.980
SRR6049661Rhizomagastrodiae_C368-T04_good_13.120
SRR6049662Rhizomagastrodiae_C368-T01_good_11.450
SRR6049663Rhizomagastrodiae_C368-T01_good_10.890
SRR6049664Rhizomagastrodiae_C368-T10_good_11.940
SRR6049665Rhizomagastrodiae_C368-T10_good_11.940
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.08
Mother_JuvenMother tuber of Juvenile 0.00