Detail information of GWHGAAEX010483/evm.TU.scaffold_3.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|48477708|ref|YP_023414.1|1.00E-08glycerophosphoryl diester phosphodiesterase [Picrophilus torridus DSM 9790]
KOGKOG24219.00E-120Predicted starch-binding protein
nrgi|743876769|ref|XP_010907663.1|1.63E-130PREDICTED: glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like [Elaeis guineensis]
Swissprottr|Q9SGA2|GDPD1_ARATH3.00E-120Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic {ECO:0000305} (Precursor)
trEMBLtr|G0TEB4|G0TEB4_LUPAL5.00E-128Glycerophosphodiester phosphodiesterase 2 {ECO:0000313|EMBL:ADK26135.1}
TAIRAT3G020409.00E-120senescence-related gene 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000281586058159988+
Transcript Sequence

Network for GWHGAAEX010483

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03009.16GDPD443191.70E-45
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18696GDE1 Glycerophospholipid metabolism map00564

Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process
GO:0008081Molecular Functionphosphoric diester hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.910
SRR2545915Juvenile tuber0.130
SRP108465SRR5643513five period of Gastrodia elata0.240
SRR5643514five period of Gastrodia elata1.260
SRR5643515five period of Gastrodia elata0.560
SRR5643524five period of Gastrodia elata0.350
SRR5643525five period of Gastrodia elata38.280
SRR5643528five period of Gastrodia elata21.420
SRR5643658five period of Gastrodia elata48.800
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.480
SRR5643663five period of Gastrodia elata0.210
SRR5643664five period of Gastrodia elata0.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.890
SRR6049655Rhizomagastrodiae_C368-T10_good_10.600
SRR6049656Rhizomagastrodiae_C368-T07_good_11.250
SRR6049657Rhizomagastrodiae_C368-T07_good_11.890
SRR6049658Rhizomagastrodiae_C368-T04_good_12.230
SRR6049659Rhizomagastrodiae_C368-T04_good_10.960
SRR6049660Rhizomagastrodiae_C368-T01_good_11.020
SRR6049661Rhizomagastrodiae_C368-T04_good_11.250
SRR6049662Rhizomagastrodiae_C368-T01_good_10.770
SRR6049663Rhizomagastrodiae_C368-T01_good_11.730
SRR6049664Rhizomagastrodiae_C368-T10_good_11.110
SRR6049665Rhizomagastrodiae_C368-T10_good_11.110
SRP279888GastroGastrodia elata tuber 0.07
JuvenJuvenile tuber0.21
Mother_GastroMother tuber of Gastrodia elata 4.47
Mother_JuvenMother tuber of Juvenile 0.31