Detail information of GWHGAAEX010507/evm.TU.scaffold_3.162


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG48430Uncharacterized conserved protein
nrgi|743794381|ref|XP_010924156.1|0PREDICTED: uncharacterized protein LOC105047065 isoform X1 [Elaeis guineensis]
trEMBLtr|M0RTM8|M0RTM8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P19480_001}
TAIRAT5G084500Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000021102230811063719+
Transcript Sequence

Network for GWHGAAEX010507

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08642.9Rxt34825243.80E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016575Biological Processhistone deacetylation

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.680
SRR2545915Juvenile tuber45.830
SRP108465SRR5643513five period of Gastrodia elata29.920
SRR5643514five period of Gastrodia elata27.460
SRR5643515five period of Gastrodia elata22.490
SRR5643524five period of Gastrodia elata26.550
SRR5643525five period of Gastrodia elata35.810
SRR5643528five period of Gastrodia elata27.850
SRR5643658five period of Gastrodia elata33.800
SRR5643659five period of Gastrodia elata22.050
SRR5643660five period of Gastrodia elata21.940
SRR5643661five period of Gastrodia elata20.630
SRR5643662five period of Gastrodia elata21.710
SRR5643663five period of Gastrodia elata23.370
SRR5643664five period of Gastrodia elata24.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.340
SRR6049655Rhizomagastrodiae_C368-T10_good_131.170
SRR6049656Rhizomagastrodiae_C368-T07_good_135.780
SRR6049657Rhizomagastrodiae_C368-T07_good_141.520
SRR6049658Rhizomagastrodiae_C368-T04_good_130.510
SRR6049659Rhizomagastrodiae_C368-T04_good_125.770
SRR6049660Rhizomagastrodiae_C368-T01_good_131.610
SRR6049661Rhizomagastrodiae_C368-T04_good_124.370
SRR6049662Rhizomagastrodiae_C368-T01_good_121.380
SRR6049663Rhizomagastrodiae_C368-T01_good_125.000
SRR6049664Rhizomagastrodiae_C368-T10_good_129.050
SRR6049665Rhizomagastrodiae_C368-T10_good_129.050
SRP279888GastroGastrodia elata tuber 34.50
JuvenJuvenile tuber36.60
Mother_GastroMother tuber of Gastrodia elata 43.02
Mother_JuvenMother tuber of Juvenile 44.11