Detail information of GWHGAAEX010513/evm.TU.scaffold_3.174


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13042.00E-158Amino acid transporters
nrgi|694995863|ref|XP_009390816.1|1.12E-176PREDICTED: proton-coupled amino acid transporter 3-like [Musa acuminata subsp. malaccensis]
Swissprottr|O22719|LHTL3_ARATH6.00E-11Lysine histidine transporter-like 3
trEMBLtr|I1ICE9|I1ICE9_BRADI4.00E-173Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G51130.1}
TAIRAT4G382502.00E-158Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000021163937711640630+
Transcript Sequence

Network for GWHGAAEX010513

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans344084.30E-66
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14209SLC36A, PAT Autophagy - yeast map04138
Protein digestion and absorptionmap04974

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.150
SRR2545915Juvenile tuber11.920
SRP108465SRR5643513five period of Gastrodia elata65.770
SRR5643514five period of Gastrodia elata52.240
SRR5643515five period of Gastrodia elata49.720
SRR5643524five period of Gastrodia elata48.880
SRR5643525five period of Gastrodia elata103.110
SRR5643528five period of Gastrodia elata79.800
SRR5643658five period of Gastrodia elata174.500
SRR5643659five period of Gastrodia elata107.180
SRR5643660five period of Gastrodia elata71.620
SRR5643661five period of Gastrodia elata111.640
SRR5643662five period of Gastrodia elata143.650
SRR5643663five period of Gastrodia elata104.440
SRR5643664five period of Gastrodia elata125.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_193.180
SRR6049655Rhizomagastrodiae_C368-T10_good_1142.530
SRR6049656Rhizomagastrodiae_C368-T07_good_192.930
SRR6049657Rhizomagastrodiae_C368-T07_good_178.080
SRR6049658Rhizomagastrodiae_C368-T04_good_137.710
SRR6049659Rhizomagastrodiae_C368-T04_good_142.980
SRR6049660Rhizomagastrodiae_C368-T01_good_148.450
SRR6049661Rhizomagastrodiae_C368-T04_good_143.190
SRR6049662Rhizomagastrodiae_C368-T01_good_192.660
SRR6049663Rhizomagastrodiae_C368-T01_good_187.800
SRR6049664Rhizomagastrodiae_C368-T10_good_1106.910
SRR6049665Rhizomagastrodiae_C368-T10_good_1106.910
SRP279888GastroGastrodia elata tuber 36.04
JuvenJuvenile tuber28.38
Mother_GastroMother tuber of Gastrodia elata 63.94
Mother_JuvenMother tuber of Juvenile 31.74